Alosa sapidissima (American shad): 121693587
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Entry
121693587 CDS
T11137
Symbol
pold3
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03030
DNA replication
asad03410
Base excision repair
asad03420
Nucleotide excision repair
asad03430
Mismatch repair
asad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121693587 (pold3)
03410 Base excision repair
121693587 (pold3)
03420 Nucleotide excision repair
121693587 (pold3)
03430 Mismatch repair
121693587 (pold3)
03440 Homologous recombination
121693587 (pold3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asad01009
]
121693587 (pold3)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asad03032
]
121693587 (pold3)
03400 DNA repair and recombination proteins [BR:
asad03400
]
121693587 (pold3)
Protein phosphatases and associated proteins [BR:
asad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121693587 (pold3)
DNA replication proteins [BR:
asad03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
121693587 (pold3)
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
121693587 (pold3)
MMR (mismatch excision repair)
DNA polymerase delta complex
121693587 (pold3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
121693587
NCBI-ProteinID:
XP_041929062
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All DBs
Position
19:10073372..10080441
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AA seq
438 aa
AA seq
DB search
MDELYLDNIDEYINDHNKIVTYKWLSLALGVHVNIAKQMLYHYLDRCRKDGSNTQLHATY
LVSGKCVQNGSLCHKVSVVREDKLEDMKSRMEPAISIHVYSIQKAEIKDSSTLYSTDYDA
VRDNLKNCNKYSAIHCAAAVPMTTAELELIQEIQRTSSPEKVTKAGLTAQAPVAKTNVKT
SKSIMGMFANKSTVKSQGSNIEVKVEKKEDAPSVVEAVEVKPAGMAKFFMKSTKKQDKCI
KTEAEQSSPVEKKDPELPSKLDDEKEKGLGDFKAKRENKDPRSKTKRPDLTDSEDEKIET
GSQKKKRRRIKKPQLDSSDDEDLPAKPAVVTAESPEKTTEKQPTATPEVSTGRKIRKRRR
VLKPKTFLDEEGCIVTEKVLESESYSEDEEVETSKPKAAVFPSFPGKKEEGRKNAKKTAA
ASNKSSKQASIMGFFQKK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggacgaactatatttagacaacattgatgaatacataaatgatcataataaaatagtg
acgtataaatggctaagtcttgccctgggtgtccatgtcaacattgccaaacagatgctt
taccattacttggaccggtgtcgaaaggatgggtcaaacactcagcttcatgccacctac
cttgtctctggaaagtgtgttcagaacggtagcttgtgccacaaggtgtctgtggtgcgt
gaagacaaacttgaagatatgaagtccaggatggagccagcaatcagcatacatgtgtac
agcatccagaaagctgagataaaagacagcagtactctttacagtacagactatgatgcc
gtgagagataatctgaaaaactgcaacaagtacagtgcaatccattgtgctgctgccgtt
cccatgaccactgcagaattggagttaattcaagaaatacaacgaacctcatccccagaa
aaagtcacaaaagctggattaactgctcaagctccagttgccaaaactaatgttaaaacg
agtaaaagcattatggggatgtttgcaaacaaaagtactgtgaagagtcaggggtccaac
atagaagtgaaagtggaaaagaaagaagacgcaccttcggtagttgaggccgtggaagtt
aaacctgcaggcatggcgaagtttttcatgaaatcaacaaaaaaacaggacaaatgcatc
aagacagaagctgagcagtcgtctccagtggagaaaaaagatccagagctgccatccaaa
ttggatgatgagaaagagaagggacttggagattttaaagctaagagggaaaacaaggat
cctaggagtaagaccaagaggcctgacctcacggatagcgaggatgagaagatagagact
ggcagccagaagaagaaaaggcgaaggataaagaaaccgcagctcgatagcagtgatgac
gaagatttaccggctaaacctgccgtggtaacagcagaaagcccagaaaagacaacggaa
aaacaacccacggcaactccagaagtctctaccggaagaaagataaggaagaggagacga
gttttaaagccaaaaacgtttcttgatgaagaaggctgcatcgtgactgagaaagtgtta
gaaagtgaatcctactctgaggatgaagaggtggaaaccagcaaaccgaaggctgcggtc
ttcccatcattccctgggaagaaagaggaagggaggaaaaatgcgaagaaaacagccgca
gcttcaaataaatcttcaaaacaagcctccatcatgggatttttccaaaagaaatga
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