Alosa sapidissima (American shad): 121693728
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Entry
121693728 CDS
T11137
Symbol
zeb2a
Name
(RefSeq) zinc finger E-box-binding homeobox 2a isoform X1
KO
K23560
zinc finger homeobox protein 2
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121693728 (zeb2a)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
121693728 (zeb2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
zf-C2H2_6
zf-met
Homeodomain
Zf-C2H2_ZNF451_C
zf-C2H2_15
zf-C2H2_2
zf-WIZ
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
121693728
NCBI-ProteinID:
XP_041929301
LinkDB
All DBs
Position
2:complement(4201979..4254640)
Genome browser
AA seq
1223 aa
AA seq
DB search
MKQESMAEGPRCKRRKQANPRRKNVLNYENVVEAGSESDEEDRLLASEGEGSPAGVPSRE
ASPRVGHALLSCRGNEEIDARDGPGNHVWRHPGDINGTEERKEEYNPLSPEVSLHGVGNG
SVKGDGPSELESFFSKRKLEESVGHAASIAEYLQRGDTAIIYPEAPEEVTRLGTPEANGQ
DENENDLTPRTPDDFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEESFPCPLCSETFAY
RTQLERHMATHKPARDQPPILNEAATNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYEC
SNCKKRFSHSGSYSSHISSKKCIGLIAINGRVRNGVGTKPGSSPNSAASSPGSPALAQLR
HKLESGRSMGMSDPSSHADIKAEPLDFNEYRLMMATQQEFGGPGAFVNGSGRGGSPLGMH
GSAQNPLHLGMGLESQLMSYSMMGNNLSEVQKVLQIVDNTVCRQKLDGNPDDISKLRAYM
KEMGAQMEEQKLALASPRAGFPGVGHNSPTKSIIDYTLEKVNEAKACLQSLTEDSKRRVV
DIKKEKPNHGTEDKGQERNGQYVPFSCQFCKETFQGPIPLHQHERYLCKMNEEIKAALKP
NESLTPSHRGLFSSEQQAMMISSALSERGATSPINLFKDHVSVLKAYFAMNTEPNSEELL
KISIAVGLPQEFVKEWFAQWKAQTHQTASRKRSPPPERSSVDSNHGLAQESALARSPISL
AQYGETVSEHQRNGDSGHRLSKPHQFTGMRQMGEKPLDSMDHLRSDTSSPLNLSSTSSKN
SHSSSYTPNSLASEDAHGEPLDLSLPKHIRDLKAERKLKLNGFAIERNSEPLKHEQGTEP
LDLAHIKKEFHGSNTNAMGNNESQQEKSSSPIFGINPFGGGHMYTSLPPHGAFPPPTFMP
PAQASIPGLRHYPGLDPMSFLPHMAYTYAAGAATFAEMQQRRKYQRKPGFQGELLDGTAD
YLSGLEDLTDSDSLLSRKKIKKTESGMYACDLCDKTFQKTSSLLRHKYEHTGKRPHQCQI
CKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEEREAA
EREVRDKSTPLEPTELLMRRAYLQGLGPLGYSDPEDQVEDAAAGGRGGTILRDGSEGSGP
TREVESGAYREVESGAYREVMDRRREEGMEAEEEEGEGFERKSPMKDEGGEIGEMTGPDE
KDSPRRKTESKSDPDEEKDEDAD
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggagagcatggcggaggggccccggtgtaagaggcgaaaacaagccaaccca
agaagaaagaacgtgctgaactatgagaatgtggtggaggccgggtctgagtcggacgag
gaggacaggctgctggcgtcggagggtgagggcagtccggcgggagtgcccagccgagag
gcgtcgccacgggtgggccacgccctgctgtcctgccgtggcaacgaggagatcgacgcc
agagatggcccgggcaaccatgtctggcgccatcctggtgacatcaatggtactgaggag
agaaaagaagaatacaaccctttgagcccagaggtgtctctccatggagttggcaatggt
tcagtgaagggcgatggcccctcggagctggagagcttcttttcaaagcggaagctggag
gagagtgtgggccatgcggccagcattgctgaatacctgcagcgtggcgacacggccatc
atttacccagaagccccggaggaggtcacccgtctgggcactcccgaggccaacgggcag
gacgagaacgaaaatgacctgacaccccggacgccagacgactttgcccagctgctgacc
tgcccttactgtgaccgtggctacaagcggctgacgtctcttaaggagcacatcaagtac
cgccatgagaagaacgaggagagcttcccatgccccctgtgcagcgagacatttgcctac
cgcacacagctggaacgccatatggccacccacaagccagctcgagaccagcccccgata
ctgaacgaagcagccaccaaccgaaagttcaaatgcactgagtgtggcaaggcgttcaaa
tacaaacatcatctgaaggagcatctccgaattcatagtggtgagaagccgtacgaatgc
tccaactgcaagaagcgcttctcccactctggctcctacagctcccacatcagcagcaag
aagtgcatcggcctgatcgccatcaacggccgcgtgcgcaacggcgtgggcaccaagcca
ggctcctcgcccaactccgccgcctcctcgccaggcagccctgccttggcgcagctccgc
cacaaactggagagcgggcgatccatgggcatgtcggacccgtccagccatgctgacatc
aaagcggagccgttggacttcaacgagtaccggctcatgatggccacccagcaggagttt
ggaggtccgggtgcctttgtcaatggaagtggccgaggcgggagccccctcggaatgcac
gggtccgcccagaaccctctgcacctcggcatggggctggagtcccagctcatgagctac
tccatgatgggaaacaacctgagcgaggtgcagaaggtcctccaaatcgtcgacaacacc
gtctgccggcaaaagctggacggcaaccctgatgacatctccaagctgagggcctacatg
aaggagatgggggctcagatggaggagcagaagctggcattggcctcaccccgagcgggc
ttccccggggtaggtcacaacagccccacgaaaagcattatagactacaccctggaaaag
gtcaacgaggccaaagcctgcctccagagtctcactgaggactccaagaggcgggtggtg
gacatcaagaaggagaaacccaaccatggcactgaggacaagggtcaagagaggaacgga
cagtatgtacccttctcctgccagttctgcaaggagaccttccaagggcccattcccctg
caccaacacgagcggtacctgtgcaagatgaatgaggagatcaaggccgccctaaagcca
aacgaaagtcttactccaagccaccgagggctgtttagttccgagcagcaggccatgatg
atttcgtcggccctgtccgagcgaggagccaccagccccatcaacctcttcaaggaccac
gtgtccgtgctgaaagcctacttcgccatgaacacggagccgaactccgaggagttgctc
aagatctccatcgccgtgggcctccctcaggagttcgtcaaagagtggttcgcccagtgg
aaggcccagacacaccaaacggcgtccagaaagaggtcgcctcctccagagcgaagcagt
gttgacagcaaccacggcttggcccaggagtcagcacttgcccgatcccccatttccctc
gctcagtacggggagaccgtttcagagcaccagaggaatggggactctggacacagacta
agcaaaccccaccagtttacaggcatgaggcagatgggagagaaaccactcgactccatg
gaccacttgagaagtgacacctcttcccctctgaacctctcgtcgacatcctcgaaaaac
tcacacagtagctcttacactccaaacagtcttgcctccgaagacgcccacggcgaacca
ctggatttgtctttgccaaaacacataagggacctcaaggccgaacgaaagctcaagctg
aatggtttcgccattgagcgcaacagcgaacccctaaaacacgaacagggcactgagcct
ctggacttggcccacatcaagaaggagttccacgggtccaacaccaatgccatggggaac
aacgagagccagcaggagaagagttccagccccatctttggaatcaacccttttggtggg
gggcacatgtacacgtcgctcccgcctcacggggcatttccgcctccaaccttcatgcct
ccagcccaggctagcatcccagggctgaggcattatccaggactggaccctatgagcttc
ctgccacatatggcttacacttatgctgctggggcagccacattcgcagaaatgcagcaa
cgaaggaagtaccaacggaagcctggcttccagggggagctcctggatggtacagcggac
tatctgtcaggcctggaggacctgacagacagcgactcgctgctctcacggaagaagatt
aagaagacagaaagtggtatgtacgcgtgtgacttgtgcgacaaaacattccagaagacc
agttccctcctaagacacaaatatgagcacacaggaaagcggcctcaccagtgccagatc
tgcaagaaggcgttcaaacacaagcaccacctcatcgaacactcgcgcctgcactcggga
gagaagccctatcagtgcgacaagtgcggcaagcgcttctctcactccggttcttactcg
cagcacatgaaccaccgctactcctactgcaagcgcgaggccgaggagcgtgaggccgcg
gagagggaggtgcgggacaagagcacgccgctggagcccaccgaactgctgatgcgcagg
gcctacctgcagggcctcgggcccctgggctactccgaccccgaggaccaggtggaggat
gcggcagcaggtggccgggggggcaccattctgagggacggatctgagggaagcgggccc
accagggaggtggagtccggggcctacagggaggtggagtccggggcctacagggaggtg
atggacaggcggcgggaggaggggatggaggccgaggaggaggaaggggaagggtttgag
aggaagagcccgatgaaagacgagggcggagagatcggagagatgacgggtccggatgag
aaggactcgccgcgaaggaaaacagagagcaagtcagacccggatgaggagaaggacgag
gatgctgattaa
DBGET
integrated database retrieval system
