Alosa sapidissima (American shad): 121693840
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Entry
121693840 CDS
T11137
Symbol
uvssa
Name
(RefSeq) UV-stimulated scaffold protein A isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121693840 (uvssa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asad03400
]
121693840 (uvssa)
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
121693840 (uvssa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
121693840
NCBI-ProteinID:
XP_041929442
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Position
20:complement(2303871..2350097)
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AA seq
716 aa
AA seq
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MDSEKRDKLSELVEELTTSGEPTLNANKMKEVKKISKISNDYIEHVYHLIMTQLNQEHAE
IRLSAFNMVAELFSRSHYFRVLLVANLQEFLDLTVETDIDQPLPPPKEVAQKLKRLAIQT
VQTWHATYGEAYKKLALGFHFLKQVKKVDFQDVEARTLTERRRQEERQRRLQMVYKDKLE
KAKSEMEETREDIEVSLTEIHSCMKLLLPDPENFNMCNLEPIASSSGASTSLEFRDSNSN
EDVQPCCSRDLKEESDVMTQKKDPNDSESETEESTNDSSFLRNSGVMSHKYSLELSISDV
DLQETEDNEAILDTVKDLHRLITTKHLPAVQSWIQVFTKVEGEEQLLRQTVELKHSLETA
LQKYKTLNISHKNRHHRVMRADESDEDFEEVPEKEGFEPQVLDDLRVKYGMEPLISSPGS
VGGKKPPKQLATKHVPLTSPSTLRSKMKTWEEEQDPTSAAATLRILRQRLPSTVTENCGA
SGSSVSPEETTEVGEEKEVPVVPFGIDLYYWGKEQPTAGKIIKYSSQHQFWVPNEREEEV
VNEELSAQMKSRYITFAGRFQPVLHKCKAPMPNGGLCERQDRVKCPFHGRIVPRDDLGRP
TNPEDSERLEKERRKLQEEQPDWRDPELMREIEAATGEDLGSSKTFGKGKKGCKGKGKKR
KYPSLTDLKQSANTARSRLEKKVFNKSSMRRVTDVMNKMDKRKHEKFSNQFNYALN
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggattctgaaaagagggataaactatcagaacttgtggaagagctgactacttctggt
gaacctactctgaatgcaaacaagatgaaggaggtgaagaagatatccaagatttccaac
gactacattgagcacgtgtaccatttgatcatgacccagttgaaccaggagcatgcagaa
atcaggctgtcagctttcaacatggttgctgagttgttcagccgctcacattacttccgt
gtgcttctagtcgccaatttgcaagagtttcttgacctcactgttgagacagacatagat
cagccactgccaccaccaaaggaagttgcccagaagttgaagagactagctatccagact
gtacagacatggcatgccacctatggagaggcttacaagaagcttgctcttggcttccac
tttcttaaacaggtgaagaaggtagattttcaggatgtagaggctcgaactcttacagaa
agaaggagacaagaggagagacagagaagactgcagatggtgtacaaagacaagcttgag
aaagccaagtcagagatggaggaaacccgtgaagacattgaggtgagcttgactgagatc
cacagctgtatgaagctcttactacctgacccagagaactttaatatgtgcaacctggag
cctatagccagctcaagtggagcttcaacatccctagagtttcgagactcaaacagcaat
gaagatgtccagccatgctgcagtcgtgaccttaaggaagaatctgatgtgatgacgcag
aaaaaagatccaaatgattctgagagtgaaaccgaagagagtacaaatgatagttccttc
ctgcgcaactctggtgtgatgtctcacaaatatagtttggaactcagtatatctgatgtg
gatcttcaggagactgaagacaatgaggccattctggacactgtaaaggacctgcaccga
ctcatcaccaccaaacatctgccagctgtacagtcctggattcaggttttcaccaaagtt
gaaggtgaggagcagcttcttagacagaccgtggagctgaagcactctctggaaactgct
ttacagaagtacaaaacccttaacatcagccacaagaacaggcatcacagagtgatgaga
gctgatgaaagtgatgaagactttgaggaggtgccagagaaggaaggctttgagccacaa
gttcttgatgatctgcgtgtcaagtatggtatggaaccactcatctcttccccagggtcg
gtggggggaaaaaagcctccaaaacagctggctaccaagcatgttcccttgacttcccca
agtaccttacgttctaaaatgaagacctgggaggaagaacaggaccctaccagtgctgct
gcaaccttgcgtatcctcaggcaacgtctcccatccactgtgactgaaaattgtggagca
tcaggcagcagtgtgtcacccgaagagactactgaagtcggagaagaaaaggaagtccct
gttgtaccgtttggtatagacctctactattgggggaaggagcaacctactgctgggaag
attatcaagtactcctcacaacatcagttctgggtacccaatgaaagagaggaagaagtg
gtgaatgaagagctttctgcccagatgaagtcgcgttacatcacatttgctggtcgcttc
caaccagtgctgcataagtgcaaagctcctatgcctaatggtggtctttgtgaacgtcag
gatcgtgttaaatgtcctttccatggaagaattgttccacgagatgatttaggaaggcca
actaacccagaggattcagaacgtcttgaaaaggagaggagaaagcttcaagaagagcaa
cctgattggcgagatcccgagttgatgagagagatcgaggcagccactggagaagatctt
ggctcctctaaaacatttggcaaggggaagaagggctgtaaaggaaaagggaaaaagagg
aaataccccagcctgaccgacctgaagcagagtgccaataccgcacgctccaggcttgag
aagaaagtttttaacaagagctccatgaggcgggtcactgatgttatgaataaaatggac
aaaaggaagcatgaaaagttttccaatcaattcaactatgcgctcaattaa
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