Alosa sapidissima (American shad): 121693900
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Entry
121693900 CDS
T11137
Symbol
atl3
Name
(RefSeq) atlastin-3
KO
K17339
atlastin [EC:3.6.5.-]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121693900 (atl3)
Membrane trafficking [BR:
asad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121693900 (atl3)
Autophagy
ER-phagy
ER-phagy recepters
121693900 (atl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
Oleosin
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
121693900
NCBI-ProteinID:
XP_041929582
LinkDB
All DBs
Position
20:complement(5022195..5033842)
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AA seq
512 aa
AA seq
DB search
MGSEPGAVQIVRVNKKDHSFELDTKALEEILLAPEVRDKHVVVLSVAGAFRKGKSFLLDF
MLRYMHRRDEEDWLGVEDEPLTGFSWRGGSEPETTGIQLWNQVFLVDKSDGSQVAVLLMD
TQGAFDNQSTVKDCATIFALSTMTSSMQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFL
KPFQSLMFLIRDWSFPYEYKYGVRGGREFLDKRLQVKETQHEELQTVREHIHSCFTSISC
FLLPHPGLKVATSPAFKGQLSDVAPEFKEELRNLISTLLKPDALAEKEINGNKVTCRGLV
EFFKAYIKIYQGEDLPHPKSMLMATAEANNLAAVAAAKDQYYKNMEKVCGGDLPYVAPDS
LEEKHKFCLSDALHNFTSTKKMGGQEFCDRYQGQLQAELEELWTSFSKHNESKNVFSAFR
TPAVLFVLVCLLYVLSGILLFIGLASVSFACDCALGVSMLAMLTWAFIRYSGQYHGVGTA
IDQAAGVLLEQATVVLNKSRGTTPVLQEKKSS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggggagtgagcctggcgcagttcagatagtccgggtaaataagaaggaccactccttt
gagctggacactaaggccttggaggagattcttcttgccccagaggtgcgagataagcat
gtagtggtcctgtctgtggctggggccttccgtaagggcaagagctttcttctagacttc
atgcttcggtatatgcacaggagggatgaagaggactggttgggagtggaagatgagccc
cttacggggttctcctggaggggcggttcagaacctgagaccacaggcatccagctgtgg
aaccaggtgttcttggtggacaaaagtgatggctctcaggttgccgtacttctaatggac
actcagggtgccttcgataaccagtccacagtgaaagactgtgctacaatctttgccctc
agcacaatgaccagctcaatgcagatctataacctctcacagaacatccaggaagacgac
ctccagcagctccagctcttcacagagtatggtcgtcttgcgatggatgaaatcttcctg
aagccctttcagtctctcatgttcttgatccgagactggagcttcccctatgagtacaag
tatggcgtaaggggagggagggagtttctggacaaacgattgcaggtgaaggagactcag
catgaggaattacagacagtgagggagcatattcattcctgtttcacctcaatttcctgc
ttcctcttaccacatcctgggctaaaagtggccaccagtcctgcctttaaaggccagctc
agtgatgtggcacctgagtttaaagaggagctgcgcaacctaatctccacactgctgaag
cctgatgccctggctgagaaagagatcaatggcaacaaggtgacctgtcggggcctggtg
gagttctttaaggcatacatcaagatctaccagggcgaagacctgccacacccaaaatcc
atgctaatggccacagcagaggccaataaccttgcagctgtcgctgcggccaaagaccag
tattacaagaacatggagaaggtttgcggaggagacctgccttatgtcgcccccgactct
ctggaagaaaagcacaagttctgtctcagtgatgcactacataacttcacctccactaag
aagatgggaggccaggagttctgcgaccgctaccagggccagctgcaggccgaactggag
gagctctggacttcattcagcaaacacaatgagtcaaagaatgtcttcagtgcattccga
acgcctgccgtgctttttgtccttgtgtgcctcctgtacgtgctgtctggtatcctgctc
ttcatcggcctggcttctgtgtcgtttgcttgtgactgtgccctgggtgtgtccatgctc
gccatgctcacctgggcatttatccgctactcgggtcaataccacggagtgggcactgcc
atagaccaagcagcaggagtcttactagaacaggccacagttgtgctgaacaagtcgaga
ggtactacccctgtccttcaggaaaagaagtcaagctag
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