Alosa sapidissima (American shad): 121693909
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Entry
121693909 CDS
T11137
Name
(RefSeq) interferon-induced GTP-binding protein Mx-like isoform X1
KO
K14754
interferon-induced GTP-binding protein Mx
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121693909
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Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
AAA_16
Mer2
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
121693909
NCBI-ProteinID:
XP_041929617
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Position
2:4648384..4677702
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AA seq
628 aa
AA seq
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MSKKNSTPLEEINHLSQHYEEKVRPCIDLVDSLRSLGVEQDLALPAIAVIGDQSSGKSSV
LEALSGVALPRGTGIVTRCPLVLKLKRVKNGTQWYGMLSYQNHIKVELKNPAEVEDAVTK
AQNALAGEGKDISHEMINLEIHSTSVPDLTLIDLPGIARVATGNQSQDIEEQIKRLIETF
IKKQETINLVVVPANVDIATTEALKMAKTVDPHGQRTLGILTKPDLVDKGAEEIVVNTLN
NLVIPLKKGYMVVKCRGQKDINDKMSLTKALDREKKFFENHTHLRACLDEGKATIPHLSE
RLTNELVSHIKRSLPQLEKQIKEKLEKASTDLRRLGDGVPQDETERANFLIEKINSFNQV
LTDMVRAEEYVGDSQTRVFTNIRILFSKWKTELDNKAIQLEEYLRDEVEDSNTHRGKELP
GFVNYRTFETIVRRHVEDLEEPAMNLLRATTETITTAVNQTTSTFFEAYPSLMRAAKDPL
EDLREQEFERAEERLKSQFKMERIVYSQDGLYSRQLEAVKARPESTKPFVFVKPISADIR
EMAQHLSAYYMITSDRLANQVPLIVMYHMLEQYIVNVKAAMSGMIRHKDADSFVQEKGDI
ARKRKYLSERIERLKKARQVLAKSVPDI
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaagaattctaccccacttgaagaaatcaaccatctttcccagcattatgaa
gaaaaagtgcgaccctgcattgacttggtggactccctaaggtccttgggagttgagcag
gacctggctctacctgccatcgcggtcataggggaccagagctcaggaaagagctctgtg
cttgaagctctctcaggagtagcattgccgaggggcactggcattgttacacgctgcccc
ttggtactgaagctgaagagagtcaaaaatggcactcagtggtatggaatgctttcatac
cagaaccatatcaaagtggagctgaaaaacccggctgaagtggaggacgctgttaccaaa
gctcagaatgctcttgctggagaaggaaaagacataagtcatgagatgattaacctggag
atccattccaccagtgtacctgatctgactcttattgatctgcccggcattgctagagtt
gccacaggcaaccagtcccaagacattgaagaacagattaagagactgatagaaacattc
attaaaaagcaagagacgataaatttggttgtggtacctgcaaatgttgacatcgccacc
acagaggccctgaagatggctaaaacagtggatcctcatgggcaaaggactctaggcatc
ctgacaaaacctgacttagtggacaaaggggcagaggagattgttgtcaatactctcaac
aatctggtcatcccactcaagaaaggctacatggtggtgaagtgtcgaggccagaaagat
atcaatgataaaatgtctctgaccaaagcattagacagggagaagaagttctttgaaaac
cacacccacctccgcgcttgtctggatgaagggaaagccactattcctcacttatcagaa
agactaaccaatgaactggtgtctcacatcaaaagatccctcccgcagttggagaaacag
attaaagaaaaactggagaaggcttctacagacctgagaaggctgggagatggagtccct
caagatgaaactgaaagggccaacttcctcattgagaaaattaacagcttcaaccaggtt
ctcacagacatggtcagggcagaggagtatgttggagactcccagacaagagtttttaca
aacattcggatattattcagtaaatggaagacagaactcgacaataaagccatccaatta
gaggagtatttacgtgatgaggtagaggatagcaacactcacagaggcaaagagctgcct
ggctttgtaaactacaggacatttgaaaccattgtcagaagacatgtggaagacttagaa
gaaccggcgatgaatctcctacgagctaccacagagaccatcaccactgctgtgaaccaa
accaccagcaccttttttgaagcttatcccagtctgatgagggctgctaaggatccactg
gaggaccttagagaacaggagttcgaaagggccgaggagagactgaagtcacagtttaag
atggagagaatagtttattcccaagatggtctctacagccgccagttagaagctgtcaaa
gcgagacctgaatctactaagccctttgtctttgttaagcctatcagtgcagacattcgc
gagatggctcaacatctaagcgcctactacatgatcacctccgatagactggccaatcaa
gtgcccctgattgtgatgtaccacatgttggagcagtacattgttaatgtgaaggcagcc
atgtcaggcatgataagacacaaagatgcagacagttttgtccaggagaaaggagacatc
gcccggaagaggaagtatctttcagagcgaattgagagattgaagaaggcccgtcaagtt
ctggccaagtctgtgccagatatatag
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