Alosa sapidissima (American shad): 121693943
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Entry
121693943 CDS
T11137
Symbol
matr3l1.2
Name
(RefSeq) matrin 3-like 1.2
KO
K13213
matrin 3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asad03041
]
121693943 (matr3l1.2)
Spliceosome [BR:
asad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121693943 (matr3l1.2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
121693943
NCBI-ProteinID:
XP_041929749
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Position
20:complement(5364949..5377373)
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AA seq
1142 aa
AA seq
DB search
MSQKIPGDSAQKGFAVGRGLLAAAETLNYSMGEHSSNSLYGSTSRPMSNMARGPGGGQGK
DHDPQLSRRVGSHLSNTMKLFASLGLSPTDLDELAQVPEENISVETLPNLIMQLKNRKVE
ASRRMSGDPRDMSALSPETSYRPSRDNWGDMQEGHLDPSMGQATGRGAQGDFGYGSMQDM
SSRGYDRIDYGHTGASNGNRDRQYSELSHDSYRGLGMGSSSTPDSMLMQRRMGSPSQGKV
QDFLGVMPHMFPHVCSLCDFDVHSTMEWNQHTNGLRHSENCRLLLQMYPDWDPHMPSTRV
SGPHPMDTPNRSDGLLGAAPRGTGLQRGGMSSGWGSDSGYGFSNKSQSLPGPGKVRRGRV
VVIKYDRKPLSSNSLFALAKPFGTIREHLVLKKKAFLEMATHEEALAVAEFYQRKPAIVH
GKEVQVYLSREIAVIDKSQNEKEPTDPKGRQSQVVFFSNLPRDHEKKSELLTVARRFGTV
EKHLFLNGEAFIQMETPDDAEMLVKYYTLNPLTIRGKSIRLNICTKYKTLTVNPGRGGQG
RDRKGNSSISKTSSKSQRSSTASKGKESSSEKADTSQAAEEEDDAQAEGSGDEVAGVMEG
DDQEEGDQDPDQDVQMEEPAAAEKAGQPESEENAEEEGDVKPSDEVEGDEEADADAASQE
KAQEEEKEGTSKDNAAQEEEEEAAEPSHSTETGKDTEANEGAQDDCVAEEPSEDQTGEPD
FPENMDEFVTLDELADEDDGDRLDSKSRGRDSSGSSRKSGGLRVVNVVGFRRGIDYLDEI
LSLAKPFGKVVRHLVLNVRPEAFLELSNEQEARAMVSFYNSNVLPSVCGKAVKIYHSQTY
ATIQSGKVIYVGQIPYFKTSDATLLKIAEPFGKIRRYYMNRSRNECFIEMERGEDAEAMA
EAYKNNPPKFQGKRLTVYMSRKYKQLKHGHRPPSPEPEEKRPPKRERTAADGQNTGDSPV
KAAAKKDEQPPAKKLKEDKEAEQPDTAQTSTAEVPSEQPEESAKEKEEEEGEDEGEAEKK
EEKQDNTDDQKINAEEDSKNGAVEPPAASSSEDAPKTEEAAPTEPAEKKPELTPLTLGAY
EPNIPVGVEFVKMGYYCRVCFLFYSNEETAKKTHCSSKAHYEKLKKHLEKDKAKALSSGA
KN
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaagattccgggcgacagtgctcagaaaggctttgcggtagggcgcgggcta
cttgccgctgctgaaacgttgaattacagcatgggagagcatagctccaacagcctttat
ggctccacttctcgaccaatgagcaacatggctagaggcccaggaggcggacaaggaaaa
gaccatgaccctcagctctcccgtcgtgtgggcagtcaccttagcaacactatgaagctg
ttcgccagccttggtctgtcgcccacagacttggatgagctggctcaagttccagaggag
aacatcagtgtggaaactttgcccaatcttatcatgcagcttaagaaccggaaggtggag
gccagccgccgcatgtctggtgaccctagggacatgtccgccctctccccagaaacctca
taccgaccaagtagagacaactggggagatatgcaggaagggcacctggacccctccatg
gggcaagcaacaggccgcggtgcacaaggcgactttggttacggttccatgcaagacatg
tcctctcgagggtatgaccgaatcgattatggccacactggtgccagcaatggcaaccga
gaccgtcagtattctgagctttcccatgactcttaccgtgggcttggcatgggctcctct
tcaacacctgacagcatgcttatgcagagaagaatggggtccccttcccagggtaaagtg
caggacttcttgggagtcatgccccacatgtttccacatgtgtgttccctttgtgacttt
gatgtgcattctaccatggaatggaaccagcataccaatggcttacgccattcagaaaac
tgcagactcctcttgcagatgtacccagattgggatcctcacatgccttccaccagagtc
tcggggccgcatccaatggacacacccaaccgttctgatggccttctgggggctgcccca
agaggaactgggctacagagagggggcatgagttccggctgggggtctgattctggctat
ggattttcaaataaatctcagtcgcttcctggacctggaaaggtcagaagaggcagagtt
gtggtgataaaatatgaccggaagccactgtcgtcaaatagcctttttgctctagcaaaa
ccttttgggactattcgtgagcatttagtgctcaagaagaaggccttccttgaaatggcg
actcatgaagaggctctggctgtagctgagttctatcagaggaaacctgcaattgtgcat
ggaaaggaagtccaggtgtatttgtccagagagatcgctgttattgataaaagtcaaaat
gagaaggaacctacggaccctaaaggcagacaaagtcaagttgtttttttctcaaatcta
ccaagagatcatgagaagaagtcagagttgctcacagtcgcccgtcgatttggcacggtt
gagaagcacctgttcttgaacggcgaggcatttattcaaatggaaactccggatgatgca
gaaatgttagtgaaatactacaccttgaaccctctgaccatcagagggaaaagcatccgc
ttgaacatctgcactaaatacaagaccctaacggtgaatcctggcaggggtggccaaggc
agggacaggaagggcaacagctccatttccaaaacgtcatctaagagccagaggtcctcc
actgcctccaaaggcaaggagagctcgtccgagaaggccgacacatcccaggccgccgaa
gaggaggatgatgcccaggcagaaggatcgggcgacgaagtggccggggtcatggaaggg
gacgaccaagaggaaggtgaccaggaccctgaccaggacgtgcagatggaggagcctgcc
gccgcagaaaaggctggccagcccgaatcggaggagaacgccgaggaggagggtgatgtg
aagccctccgacgaagtggagggtgacgaagaagctgacgctgacgcagcttcacaagag
aaagcccaggaggaggagaaagagggcacctcaaaggacaacgctgcacaggaggaggag
gaggaggcagccgagccgtctcactcgacggagacgggcaaagacacggaagcaaatgag
ggggctcaggatgactgtgttgccgaggagccatcagaggaccagactggtgagccagat
ttccctgagaacatggatgagtttgttactctggacgagttagctgatgaagacgatgga
gaccgactcgattcaaagtctagaggaagggactcatcaggaagctcaaggaagagtggg
ggactgagagttgtcaatgtcgttggattcagaagaggcattgattatcttgacgaaatc
ctgtcactcgccaagccatttgggaaagttgtccgtcacctggttctgaatgttcggcca
gaggctttcctggagctctcaaatgagcaagaagcaagggctatggtcagtttctacaac
agtaatgtgctcccgtctgtgtgtggcaaagcagtgaagatttaccattctcagacttat
gcaaccattcagagcggcaaagtcatatatgtaggacaaatcccatacttcaaaacatca
gacgcgaccctcctgaaaattgcagagccatttggaaagatcagacgctactatatgaat
cgatctcgcaatgagtgtttcattgaaatggagaggggggaagatgctgaggcgatggca
gaggcctacaagaacaatccacccaaattccaaggaaaacgtctgactgtctacatgagc
aggaaatacaaacaactcaaacatggacacagaccgccgagcccagagcctgaggagaaa
cggccgccgaagagggagcgcacggccgcagacgggcagaacacgggcgactcgcccgtc
aaggctgctgccaagaaagacgagcagcctcccgccaagaagctgaaggaggacaaggag
gccgagcagccggacacggcgcagacgtcaacggcagaagtgcccagtgaacagcctgag
gagagtgcgaaggagaaggaggaggaagagggggaggacgaaggggaagcggagaagaag
gaagagaagcaggacaacacagatgaccaaaaaataaatgctgaagaggactccaaaaat
ggagccgttgaaccaccagcggcctcttccagtgaggatgccccaaagaccgaagaggcg
gcccccactgagcctgctgagaaaaaacctgagcttaccccacttactcttggtgcatat
gagcctaacatccctgttggtgtggagtttgtgaagatgggttactactgccgagtgtgc
ttcctcttctactctaatgaggagactgctaagaagactcactgcagcagcaaggcccac
tatgagaaactaaagaaacaccttgaaaaggataaagcaaaagcactgagctctggcgcg
aagaactga
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