Alosa sapidissima (American shad): 121694103
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Entry
121694103 CDS
T11137
Symbol
gabrb2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2a isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
asad04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121694103 (gabrb2a)
04082 Neuroactive ligand signaling
121694103 (gabrb2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121694103 (gabrb2a)
Ion channels [BR:
asad04040
]
Ligand-gated channels
GABA-A
121694103 (gabrb2a)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121694103
NCBI-ProteinID:
XP_041929985
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All DBs
Position
20:22538733..22577910
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AA seq
524 aa
AA seq
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MERIRKSLSIFVIGPLIMNLVCAQRDPSNMPVVKDTVDRLMKGYDIRLRPDFGGAPVAVG
MNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYTEIPLNLTLDNRVADQLWVPDTYFL
NDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGY
TTDDIEFYWRGGDGAVSGVERIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIG
YFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVK
AIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKAAEKAALANNEKMRPDPNKWLMG
NVVQRDDALYARMKQREIDAYDSMWDPIFAEDAALGLGEQRNKMNPDDNILLGTLEMKNE
MVSSDLSRALGGGGGGGVDPRSTMLAYDSSTLQYRRAALARQNYGHSALERHATKKSRLR
RRASQLKVNIPDLSDVNSIDKWSRMIFPTVFSFFNVVYWLYYVH
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggagagaatcaggaaaagcctatccattttcgtcattggtcctttaattatgaatttg
gtttgcgcacaaagagaccctagcaatatgcctgtggtcaaggatacggtggatagactg
atgaaaggatacgatattcggttgaggccagattttggaggtgctccggtggcagtcggg
atgaacatagacatagccagcatagacatggtatcggaggtgaacatggactacaccttg
accatgtacttccagcaagcatggcgagacaagcgtttgtcttacaccgagattcctctc
aacctcacactggataaccgcgtggccgaccagctctgggtcccggacacttacttcctc
aacgacaagaagtcctttgtgcatggagtcacggtcaagaacaggatgattcggctacat
ccagatggaacagtgctttatggattgaggatcaccaccacggcagcctgtatgatggat
ctgcgccgataccctctggatgagcagaactgcaccctggaaatagagagctatggctac
accacggacgacatcgagttctactggagaggcggggacggcgccgtctctggggtggag
agaatcgagctgccacagttctccatcgtggactacaagctcatctccaagaacgtggtg
ttctccacaggctcctaccctcgactgtcactgagcttcaagctgaagaggaacatcggc
tacttcatcctgcagacgtacatgccctccatcctgatcaccatcctctcctgggtctcc
ttctggatcaactacgacgcctcggctgccagagtcgccttaggtatcaccacggtgctc
accatgactaccatcaacacacatttgagagagacccttcccaagatcccctatgtgaag
gccattgacatgtacctgatgggctgctttgtcttcgtattcttggccctgctggagtac
gccttcgtcaactacatcttcttcggacgggggccgcaaaggcagaagaaggcagcggaa
aaagctgccttggccaacaatgagaagatgaggcctgaccccaacaagtggttgatggga
aatgtagttcagagagacgatgctctgtatgcccgaatgaaacagagggaaattgacgca
tatgactcgatgtgggatccgatctttgcagaggacgcggcattaggactaggcgagcaa
agaaataagatgaacccggacgacaacatcctgctcggcaccctggagatgaagaacgag
atggtgtcgtccgacctgtcgcgcgcgctgggcggcggcggaggaggcggcgttgacccc
cgcagcaccatgctggcgtacgacagctccaccctgcagtaccgccgcgccgcgctggcc
cgccagaactacgggcacagcgcgctggagcgccatgccaccaagaagagccgtctgcgc
cgacgggcctcccagctcaaggtcaacatccccgacctgtccgacgtcaactccatcgac
aagtggtctcggatgatcttccccactgtcttctccttcttcaacgtagtctactggctt
tactacgtccactaa
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