Alosa sapidissima (American shad): 121694109
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Entry
121694109 CDS
T11137
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
asad04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121694109 (gabra6a)
04082 Neuroactive ligand signaling
121694109 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121694109 (gabra6a)
Ion channels [BR:
asad04040
]
Ligand-gated channels
GABA-A
121694109 (gabra6a)
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
121694109
NCBI-ProteinID:
XP_041930001
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Position
20:22526627..22536295
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AA seq
369 aa
AA seq
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MEMEYRMDMFFRQMWVDERLKFEGPIEILRLNNMMVDKIWTPDTFFRNSKRSIAHNMTTP
NKMFRIMQNGTVFYTMRLTISAECPMQLQDFPLDGHACPLYFGSYAYTNREIAYTWRKGF
EASVDVPPESSSLLQYDLVGQSLYTETYKINTGHYSVQVVHFLLQRKLGYYLIQTYVPLI
MIVGLSQVSFWINKESVPARTVAGITTVLTMTTLSISARECLPKVSYATAMDWFIAVCFA
FVASALIEFAAVNYFATLQGIRMQREKRKQSRQDSVITGNGSDDEVGSPDSGRSRQYRSN
SIISEPAQRLPNFLQSGSAIPTNMLLAGTSPIDSYSRVLFPLAFGSFNLVYWYYYLSKDT
MEKPRVLGQ
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagtacagaatggacatgttctttaggcagatgtgggttgatgagcggcta
aagttcgaaggccccattgagatccttcgccttaacaacatgatggtggacaaaatttgg
acaccggacacgttcttccgaaactccaagagatccatcgcccacaatatgacaaccccc
aacaagatgttccgcatcatgcagaatggaacagtgttttacactatgagactaacaata
agtgcagagtgtccaatgcaattgcaggactttccactggatggacatgcttgtccttta
tactttggaagctatgcatacaccaaccgcgaaatagcttacacctggagaaagggtttc
gaggcgtcagttgatgtgccgccagagtcgtccagtttactacagtatgaccttgttggg
cagagcctctacactgaaacatacaaaatcaacacaggtcattactctgtccaggtcgtg
cattttcttctccaacgaaagctaggctactatctcatccaaacatatgtgccactgatc
atgattgttgggttgtcccaagtctcattttggatcaacaaggagtcagtgccagcccgc
actgttgctggcatcaccacggtgctcaccatgacaaccctcagcatcagcgctcgcgag
tgtctgcccaaggtgtcgtatgccacggccatggactggttcatcgccgtgtgctttgcc
ttcgtggcgtccgccctgatcgagtttgcggcggtcaactactttgccactctgcaaggc
atccgcatgcagcgtgagaagcgcaaacaatcccgccaggacagcgtcatcacgggtaac
ggcagcgacgatgaagtgggatcgcctgacagtggtaggagcaggcagtaccggtccaac
tcgataattagtgagcccgcacagagactgcccaacttcctgcagtctggctcggccatc
cccaccaacatgctgctggccggcaccagccccattgactcctactcccgagtgctcttc
cctctggccttcggctccttcaacttggtctactggtactactacctctccaaggacacc
atggagaagcccagggtcctgggccagtga
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