Alosa sapidissima (American shad): 121694275
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Entry
121694275 CDS
T11137
Name
(RefSeq) transforming growth factor beta activator LRRC33-like
KO
K26316
transforming growth factor beta activator LRRC32
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121694275
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Motif
Pfam:
LRR_8
LRR_4
LRR_6
LRR_9
Motif
Other DBs
NCBI-GeneID:
121694275
NCBI-ProteinID:
XP_041930290
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Position
20:14424256..14426563
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AA seq
669 aa
AA seq
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MIMGRRLVMLMFMALYADSYSHFNKLSEDTHTRLKRNLWSQRNLSSIPLGLDEGLIKLDL
SNNLIKNFTTINLPFLERLDVSYNHLSFIHTGAFKNLVQLHDLNLASNSLNNNIISNSQA
FKDLHVLRSLDISKNNLDEEAVKQYLSSASSLDCLTATGNVVSKLTTQSFANTKNLRVIN
LENNLISKIEEGTFNPLKKLAKLNLARNNLAVICDFKLSQVTYLNLSRNSIEFFITHETE
EVYNLEVLDLSYNSLLYFPILPKHNHLKYLHLQNNRLGALGIVNSVAEANHLYKDVTGSN
HSRTENEKDSVYSDWQIMPLVHLDLSSNHFRSFPLTMFRDLQSLETLNIGNNCLQNISNS
NALSEDSRTDIHNYSLPSLLHINLKDNNIEYLSSNLSTTFPKIETMVLKGNRVRPCSGQS
FSISDLTTDVQCISFSNISTLKHLDLQENGIKTLLHGVFANSPLVSLNLAGNKQLTIAKN
ALKDVQNTLQFLSIGQNNVTDSQFGLACMRELRILNVSDNNLKNLPSTTACSPLLELDVR
NNSLTTLKNVTMSHLSIIYISGNTFNCCQATWIQSLKQENVTIPDLDRTECFHQTEIITL
SALENSNIMCFDKVTRGYALLYIIILCCVFIFVLIATFGYTLSRTSCHFVDQYSIFSASS
ISLTNLVRD
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgataatgggacgtagactggtcatgttaatgttcatggctctgtatgcagactcatac
agccacttcaacaaactcagtgaggacacacacactaggcttaagaggaatctttggagc
cagaggaatctttcctccatccctctgggcctggatgaggggctgataaagctagatttg
tcaaacaatctgatcaaaaacttcacaacaattaacctcccattcctggagagactggat
gtaagctacaaccatctgagttttatacatacgggcgctttcaaaaacttggtccagctc
cacgacctcaacctggcaagcaactcgttaaacaacaacataatcagcaacagtcaagcc
ttcaaagacctccacgtactgagaagtctggacatctcaaagaacaacctggacgaggag
gcggtaaaacaatacctcagcagtgcatcttcgctggattgcctgacagccacgggaaat
gttgtgtcaaaactaacaacccagtcttttgccaacaccaaaaacctgagagtcattaac
ttagagaacaatctgatttcaaaaatcgaagagggaacttttaaccccttgaaaaagctt
gctaaactgaacttggcccggaataatttggccgttatctgcgactttaaactttcccag
gtgacttatttaaacctcagcagaaactccatagagttcttcataacacatgagactgaa
gaggtgtataatctagaagttctggacttaagctacaacagtcttctctacttccccatt
ctgccaaaacacaaccacttgaaatatctccatctacaaaacaatagactgggtgcatta
ggaatagtgaactcagtcgcagaggcaaatcatctttataaggatgtaactggcagcaac
cactcccgaacagagaatgagaaagacagtgtatattctgactggcaaatcatgccatta
gttcacttagacttgagcagtaaccactttagatcattccccctaaccatgttcagagat
ctccagtctctggaaaccctcaacatcggtaacaactgcctgcaaaacatcagcaatagt
aatgccctcagtgaagatagtcggacagatatccataactactcactgccatccttactt
cacataaatctaaaggacaataacatagagtatctatcctccaacctttccactactttt
cctaagatagagacaatggtccttaaaggcaatagggtaagaccctgctctggacaatcg
tttagcatatctgatctcactacagatgtgcaatgcatttctttcagtaacatcagcacc
ctgaagcacttagacctccaggaaaatggaataaaaacactgctccatggtgtgtttgca
aacagtcctttggtctctctcaatctggctggcaataaacagttaaccattgccaaaaat
gctcttaaggatgtgcagaataccctacaatttctaagcattggacagaacaacgtgacc
gattctcagtttggtttggcatgtatgagggaactgagaatcctgaatgtatccgataac
aacctgaagaaccttccaagtactactgcctgttccccgctgttggagttggacgtgagg
aataacagcttgactactttaaaaaatgtgacgatgtctcatttatctattatttacata
agtggcaatactttcaactgttgtcaagccacatggattcaaagtttaaaacaggaaaat
gtaacaataccagacttggacagaacagagtgtttccatcaaactgaaatcatcactctt
tctgctttagagaattccaacattatgtgttttgataaagtgacaaggggctatgccctt
ctgtatataatcattctttgttgcgtgtttatatttgtattaattgcaacatttggctac
acactaagcagaacgtcttgccattttgtagaccaatattctattttcagtgcaagcagt
atttcccttacaaatcttgtcagagattaa
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