Alosa sapidissima (American shad): 121694276
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Entry
121694276 CDS
T11137
Name
(RefSeq) ectodysplasin-A-like isoform X1
KO
K05480
ectodysplasin-A
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121694276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
asad04052
]
121694276
Cytokines and neuropeptides [BR:
asad04052
]
Cytokines
Tumor necrosis fators
121694276
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Gene cluster
GFIT
Motif
Pfam:
Collagen
TNF
Motif
Other DBs
NCBI-GeneID:
121694276
NCBI-ProteinID:
XP_041930291
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Position
20:14399282..14419060
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AA seq
372 aa
AA seq
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MSCEALMDKFTESASRPQLHQPCTCKKRCNNCNVFVGVFILSLSLHLITLSCFLDLRSEV
KREIALNKRESASAVSGSSQMRVYHTNDSHDDIHREPSPPEPPEGIMERRAQVTAGSGSA
LWRTKRGTNRRHDSESPSGKRKDKVKKGFIRHPFPGKRRQGAPGPPGQPGPPGPQGPPGI
PGIPGIPGSNALGPAGPPGPPGPKGPPGPQGPAGAVDKSKLKEFQPAVVHLQGQETTIQV
REDLSEGVLKNWKMISVHHKVFKMHSRSGELEVLVDGIYFIYSQVEIYYLNFTDIASYEV
LVDRTPFLRCTCSIETGQRKFNTCYTAGVSLLRAHQRISIRMVYQDTLISMTDHTTFLGS
VRLGDLPTTGQA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgcgaagctttaatggacaagttcacggagagcgcgtcaagacctcagctccat
cagccttgcacgtgcaagaagaggtgcaacaattgcaacgttttcgtcggggttttcatc
ctgtcgctgtcgctacacttaataacactgtcctgctttctggacctgcggtctgaggtg
aagcgggagattgcactgaataagcgagaatccgcgtcagctgtcagcggatcttcccag
atgagggtgtaccacaccaatgactcacacgatgacattcaccgcgaacccagcccgcct
gagccaccagaggggattatggaaagacgggcccaggtgacggcaggatctggcagcgca
ctttggcggacgaagcgtggcaccaaccgaagacacgactcagaatccccctccggtaaa
cggaaagataaagtcaagaaaggtttcatccgacatcctttcccaggaaagaggcgacag
ggagcccctggtcctccaggccaacccggacccccaggccctcagggccccccaggaatt
cccggtattccggggatcccaggttccaatgccctggggccagccggaccacccggaccg
ccagggccaaaaggaccacctggcccccaggggccggcaggtgctgtggacaaaagcaag
ctaaaagaatttcagcctgctgtggtgcatttgcaaggccaagaaacaaccatacaagtt
agagaagatctttcagagggcgtcctgaaaaactggaagatgatctcggtgcaccacaag
gtcttcaagatgcactcgcgctctggcgagctggaggtgctcgtggacggcatctacttc
atttatagtcaggtagaaatttactacctcaacttcacggacatcgccagctacgaggtg
ctggtggaccgaacgccgttcctgcgctgcacctgcagcatcgagacgggccagcgcaag
ttcaacacgtgctacacggcaggcgtgagcctgctgcgggcgcaccagcgcatctctatc
cgcatggtgtaccaggacacgctcatcagcatgactgaccacaccaccttcctgggcagc
gtgagactcggagatttgccgaccaccggacaggcgtga
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