Alosa sapidissima (American shad): 121694546
Help
Entry
121694546 CDS
T11137
Symbol
pdlim3b
Name
(RefSeq) PDZ and LIM domain protein 3b isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121694546 (pdlim3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121694546 (pdlim3b)
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121694546 (pdlim3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121694546
NCBI-ProteinID:
XP_041930669
LinkDB
All DBs
Position
20:20904477..20919550
Genome browser
AA seq
386 aa
AA seq
DB search
MPQNVVLDGPAPWGFRLMGGKDFNQPLTVSRVTPGSKASVANLCPGDIILAIDGAAAEDM
THGEAQIKIRDAGNQLTLKIERPETRLWSPAVSADDGKVNPFKINLEAEQQEYKPIGTGH
NRRAQPFVAASLDDNRQVVSSSYNTPIGLYSAGNIQDALHGQIRGLANDKPEGTPAQRPM
GNVVQGGSNPPQPVTQPVANSGPNQFMAPTDQYNSPIALYSEANVASAQQQAQMSAGEEN
SSPSGKMLSSIEDSHVYRMLQDNQEPTHEPRQSGSFRALQDYIDSDGSRPLVTRSVRAPV
TKPSQAASTLSKLPLCDKCGQGIVGTVVKARDKFRHPACFVCSDCDINLKQKGYFFVEGQ
LYCEMHARVRTAPVDGHDLIAVFPSS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgccacagaacgtggtcctggacggacctgccccctggggattccgtctcatgggaggc
aaggacttcaaccagccgctgaccgtctcgagggtgacccccggtagtaaggcgtccgtg
gccaacctgtgccctggcgacatcatccttgccatagatggagccgcagccgaggacatg
acgcatggcgaagcgcagatcaagatcagagacgccggcaaccagctcacccttaaaatt
gagagacctgaaaccagactctggtctcccgctgtctccgccgatgacggcaaagtaaac
cccttcaaaatcaacctggaggctgagcagcaagagtacaaaccgatcggcacagggcac
aaccggcgggcccagccgttcgtggccgcaagcctggacgacaaccgacaggtggtgagc
tcgtcctacaacacgcctataggcctctactccgcgggcaacatccaggatgccctccac
gggcagatccggggcctcgccaatgataagccagagggcacaccagcacaaaggcccatg
ggaaatgtagttcaggggggcagtaatcctccccagccagtcactcaaccggtcgctaac
tctggccccaaccagttcatggcccccacagatcagtataactcccccattgctttgtac
tcagaggccaatgtcgcaagcgctcaacagcaggctcagatgtctgctggagaagagaac
tcatcgccaagtggaaaaatgctgtcatccatcgaggactcccatgtgtaccgcatgctc
caggacaaccaggagccaacccacgaaccccgacagtctggctccttcagggctctgcag
gactacatcgacagtgacggtagcagacccctggtgaccagaagtgtacgagccccagtg
accaagccctcccaggcggccagcacgctgtccaaactgccgctgtgtgataagtgtggc
cagggcatcgtgggcactgttgtgaaggcccgggacaagttccgccaccctgcttgtttc
gtgtgctccgactgtgacatcaacctgaagcagaagggctacttcttcgtggagggtcag
ctgtactgcgaaatgcatgcccgcgtccgcacagcgcccgtggatggccacgacctgatc
gctgttttcccctccagttag
DBGET
integrated database retrieval system
