Alosa sapidissima (American shad): 121694564
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Entry
121694564 CDS
T11137
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2-like
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
asad04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121694564
04082 Neuroactive ligand signaling
121694564
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121694564
Ion channels [BR:
asad04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121694564
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
121694564
NCBI-ProteinID:
XP_041930700
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Position
20:complement(7291516..7307489)
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AA seq
509 aa
AA seq
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MAVPVTSVSLLALLALVSMVLSAEIEERLVGQLLSPERYNKLIRPAVNTSQVVTISIQVS
LAQLISVNEREQIMTTNCWLTQIWNDYRLIWDPDEYEGIRKVRLPSQHIWLPDIVLYNNA
DGTYEVSFYSNAVVTYNGEVAWLPPAIYKSACKIEVRDFPFDQQNCTLKFRSWTYDHTEI
DLVLMSDFASRDDFKPSGEWDIVSLPGRKNEDPNDDTYLDITYDFIIKRKPLFYTINLII
PCVLITSLAILVFYLPSDCGEKITLCISVLLALTVFLLLISKIVPPTSLAVPLIGKYLMF
TMVLVTFSIVTSVCVLNVHHRSPSTHTMPSWVKRLFLVRLPAFLFMRRPGGSSNVRERFR
HRHRKCSFSDPKTGEAAGQGGSAGGGGGGGGSGDSPSTFFVNEDSAKRYGWHSGDLPESG
ASGTEFRRRMTLRCNVDVQEAVDGVRYIAEKMKTEDDDEGIIEDWKYVAMVIDRLFLWVF
VLVCVTGTIGLFMQPLFQSLNTPTVDDGE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcccagtgacttcagtatcgttacttgctctccttgcactcgtttcaatggtg
ctgagtgccgagatcgaggagaggctggtgggtcagctgctgtcacctgagaggtacaac
aagttgatcaggccagccgtcaacacaagccaggtcgtcaccatcagcatacaggtgtcc
ctggcccagctcatcagtgtgaatgagagagagcagataatgaccaccaactgctggctc
acacagatctggaatgattacaggttaatatgggatcctgatgagtatgagggcatcaga
aaagttcgccttccgtctcaacacatctggttaccggatatcgtcctgtacaacaatgct
gatgggacatacgaggtgtccttctactctaatgcggtggtgacttacaatggtgaggtg
gcctggctacctccagccatctacaaaagcgcctgcaagatcgaggtgcgcgacttcccc
ttcgaccagcagaactgcacgctcaagttccgctcctggacctacgaccacacagagatc
gacctggtgctcatgtccgactttgccagccgcgacgacttcaagccgagtggcgaatgg
gacatcgtctcgctgcccggccgcaagaatgaggacccgaatgacgacacctacctggac
atcacctacgacttcatcatcaagcgcaagccgctcttctacaccatcaacctcatcatc
ccctgcgtcctcatcacctccctggccatcctggtgttctacctgccgtccgactgcggt
gagaagatcaccctctgcatctccgtgctgctggccctcactgtgttcctcctgctgatc
tccaagatcgtgccgcccacttcgctggccgtgccgctcatcggcaagtacctgatgttc
accatggtgctggtgaccttctccatcgtgaccagcgtgtgcgtgctcaacgtgcaccac
cgctcgcccagcacgcacaccatgccgtcgtgggtcaagcgcctcttcctcgtgcgcctg
ccggccttcctcttcatgcggcggcccggcggcagctccaacgtgcgcgagcgcttccgc
cacaggcaccgcaagtgctccttttccgaccccaagacgggagaggccgccggtcaggga
ggctccgccggaggaggaggaggaggaggagggtccggcgactcgccctccacgttcttc
gtgaacgaggactcggctaagcgctacggctggcactcgggcgacctgccggagagtggc
gccagcgggacggagttccgccgccgcatgaccctccgctgcaacgtggacgtgcaggag
gccgtggacggcgtgcgctacatcgccgagaagatgaagacggaggatgacgacgaaggg
atcatcgaggactggaagtatgtggccatggtgatcgacaggctgttcctgtgggtgttc
gtgttggtctgtgtgaccggcacgataggactgttcatgcagccgctgtttcagagcctg
aacacgcccacggtggacgacggcgagtga
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