Alosa sapidissima (American shad): 121694682
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Entry
121694682 CDS
T11137
Symbol
cdx4
Name
(RefSeq) homeobox protein CDX-4
KO
K09312
homeobox protein CDX1/4
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121694682 (cdx4)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121694682 (cdx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
121694682
NCBI-ProteinID:
XP_041930889
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Position
20:3662236..3664880
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AA seq
271 aa
AA seq
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MYVGYLLDKESSMYHQGPVRRSSINLPPQNFVSTPQYSDFTGYHHVPNMDTHHQSTGAWG
APYGAPREDWGAYSLGPPNTISAPMSNSSTGQVSYCSTDYNPMHAPGSAVLPPPTENISA
AQLSPDREKRNSYQWMSKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIRR
KAELAVSLGLSERQVKIWFQNRRAKERKLIKKKMGQSDGSGGSVHSDPGSVSPLPVPGSL
SPSDIHGALYPPTGMNTLPSMRNIQQVTVTQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgggatatcttttggataaagagagcagcatgtaccaccaaggacctgtacgt
cgttccagcatcaatttaccaccacagaacttcgtttcaacacctcaatattctgatttt
actggatatcatcatgtgcccaacatggacacgcaccatcaatctacgggggcatgggga
gctccttatggtgcaccaagggaggactggggtgcctatagtctgggaccccctaatact
atatcggcacccatgagcaattcttccacgggacaagtttcctattgctcaactgattac
aatcccatgcacgctccaggatctgctgtattacctccacctacagaaaatatatccgcg
gcccagctttctccagacagagaaaagcgcaattcctatcagtggatgagcaaaactgtc
cagtcgtcttcaacaggcaaaacaagaacaaaagagaaatatcgggtggtgtacaccgat
catcagaggcttgaattggagaaggaattccattttaaccgttacatcaccatcagacga
aaggcagagctggcggtgagcctcggactttcagagcgacaggtgaagatctggttccaa
aatcgcagagccaaggagcgaaagttaatcaaaaagaaaatgggccaatctgacggcagc
ggagggtctgtacatagtgacccaggttcggtgagccctctacctgtgcctgggtctctg
agtccgtcggatatacatggtgcactctatccaccaacaggcatgaacaccttaccatcg
atgaggaacatacaacaagttactgttacacagtaa
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