Alosa sapidissima (American shad): 121694705
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Entry
121694705 CDS
T11137
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121694705 (sox3)
Transcription factors [BR:
asad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121694705 (sox3)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121694705
NCBI-ProteinID:
XP_041930926
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All DBs
Position
20:3846721..3849754
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AA seq
298 aa
AA seq
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MYSMMETEIKSPLPQSNSGSAAGGKNNSSNEERVKRPMNAFMVWSRGQRRKMAQENPKMH
NSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYSL
PGGLLAPGANAVNNVSVGQRMDSYAHMNGWTNSAYSLMQDQLSYPQHHSMNSPQIQQMHR
YEMTGLQYPMMSTAQTYMNAASTYSMSPAYTQQTNSAMGLGSMASVCKTEPSSPPPAITS
HSQRACLGDLRDMISMYLPPGGDSADHAGLQTSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatggaaaccgagatcaagagtccgctcccgcagtccaactcgggttcg
gcggcaggcggaaagaacaacagttccaacgaagagcgggtgaagaggcccatgaatgcc
ttcatggtgtggtcccgtggccagcggaggaagatggctcaggagaatcccaaaatgcac
aactcagagatcagcaagcggcttggagctgactggaaacttctgactgacgccgagaaa
agacctttcattgacgaggccaaaaggctgcgagcaatgcacatgaaggagcatccggat
tataaataccgtccccgcagaaagaccaagaccctgctcaagaaagacaaatattccttg
cctggaggacttttggcgccaggtgccaacgctgtcaataatgtctctgtaggacaacga
atggacagctacgcgcacatgaacggttggacaaacagtgcttattctcttatgcaggac
cagttgagctacccacagcaccacagcatgaacagtccgcagatccagcagatgcacagg
tacgagatgaccggcctccagtaccccatgatgtccacagcccagacatacatgaacgcg
gcatccacatacagcatgtccccggcgtacacacagcaaaccaacagtgccatgggcttg
ggatccatggcatcagtgtgcaagacggagcccagttcgcctccacctgccatcacctcc
cactctcagagggcatgtttaggtgacctgagggacatgataagtatgtaccttcctccc
gggggagacagcgcggatcatgccggcctgcaaaccagtcgtttacacagcgtgcatccg
cactatcagagtgctgggactggagtgaacggaacgctacccctcacacatatctaa
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