Alosa sapidissima (American shad): 121694939
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Entry
121694939 CDS
T11137
Name
(RefSeq) LOW QUALITY PROTEIN: teneurin-1-like
KO
K24473
teneurin
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121694939
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
EGF-like domain-containing proteins
Other EGF-like domain-containing proteins
121694939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TEN_YD-shell
TEN_NHL
EGF_TEN
EGF_Teneurin
Ten_N
GBD_Tenm3
Teneurin_ABD
TTR_TEN1-4
FN-plug_TEN1-4
Tox-GHH
EGF_2
RHS_repeat
NHL
EGF_Tenascin
CarboxypepD_reg
EGF_DL_JAG
JAG1-like_EGF2
RHS
Motif
Other DBs
NCBI-GeneID:
121694939
NCBI-ProteinID:
XP_041931274
LinkDB
All DBs
Position
20:complement(13888552..14094763)
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AA seq
2725 aa
AA seq
DB search
MEEMDSKPYQPLSKARHEMEMAYTSSSDESEDGRRRAKSYTSRETLPDYGQELRLNYNSH
SKRQTTFSETAQEIDFAKTQPQMLGSSYQEELCPGPQLGYSLGMGSDVEEDEVEGDPSPS
HALHLWMQEVKSEQSSCLSSRANSVLSLTDTEQERKSDAENDNPSSPATQFTFRPLPPPP
PPPHACTCARPAPYAHVTLQRSTMPAQSHARDRDGQGTDGIGQNDSSQVNRNNWVLNSNI
PLETRHFLFKHGSGSSTLLSAANQNYPLTSNTVYSPPPRPLPRSTFSRPMFTFNKPYKCC
NWKCTALSASAITVTLALLLTYVIAVHLFGLTWHLRPADPQLYENGVSKLNRPPDTSLAT
LPPLEGLGPDKSPRVKGEKLQRGRAIDRGEVDIGAQVSQVIPPSLFWRFHLTVHHPTYVK
FNLSLSREALLGVYGRRNLPPTHTQFDFVKLLDGKHLLKVEPKGPETPGPGPGMGSGPRN
QPLSGLQETGFIEYMDPGTWHLALYNDGKKMETVLILSTPIDTMDGCSTSCNGNGECVAG
HCHCFPGFLGPNCEKDTCPVLCSGNGEYEKGRCACHAGWKGPECSIQEDQCVDPTCSNHG
TCVQGICICVPTYKGNNCEEVDCLDPQCAGHGVCVRGDCLCSPGWGGLSCESPLPTCQEQ
CSGHGTYLPDTGTCTCQPNWTGADCYIEVCPVACGSHGVCTEGQCQCEEGWEGLACDQRA
CHPRCEEHGQCRDGKCECHPGWEGEHCTIAHDFDDVVKDGCPGLCNGNGRCTLEQSGWHC
VCQTGWSGPGCNIITERECDDNMDNDGDGLLDCVDPDCCEAMVCSASPLCQGSPDPGALS
CSRARPPLGPPPPRTFFQRVHFLLGKTGTHTLHGDIPFDRSQVAVVRGQVVAVDGTPLVG
VNVTFFQHPEYGYTISRQDGSFDLVTAGAISVTLVFQRPPFLMQRRTVWLPWNSFMVLDK
VVMARTEVVAPVCDITSFVSPYPVVLPSPLTRYTGECVARGPVIPELQAVQEEIVIPGSF
VKLSYLSTRTAGYQSLLRIILTHASMPAGLSKVHVSAAIEGRLYQKWYPAAPGLVYVLAW
NKTDIYGQEVWGLTEAIVSVGYEYDSCPDFILWERRTALIQGFEMMGSNLGGWSLDKHHV
LNLQSGILHKGNGENLFISQQPPVITTVMGNGYYRTIPCMGCSGPAVQSKLFAPVALACG
SDGSVYVGDFNFVRRILPSGHTYNILELKNRDTRHSTSPAHKYYLALDPVHETLYLSDTS
SRKVFRLKTLSEPRDPVRNMEVVAGTGDQCLPFDQSHCGEGGKATAASLNNPRELDPPLS
LIKRAEDWLCSSSGVRLEWPTDLAVNPMDNSLYILDNNIVLQVSESLQVRIVAGRPIHCQ
VPGIDHYLVSKSAVHSTLEAAKAIAVSQYGVLYIAETDERKINRVQQVTTNGEISVIAGA
PADCDCKIDPNCECFSGDGGYARDARLEAPSALTVSPNGTLYIADQGNIRIRAVSANRPR
PTPAGLYEVPSLPDQELYVFSSNGTHLHTRHLITGDFLHNFTYDSAEGRLSAVVASNGQA
VHVRREGGAGGGGGGGGSGGSGGGGAPLWLVVPGGQVFWLSVSLAGGRALKRVSAQGHDV
AHLSYHGGTGLLATKSNENGWTTVYEYNSEGHVINVTFPTGEVTSYHGSMEKSVRVEVDS
SNSENFVTATNFSATDTIFTFRQDHAQNSYRVSADGSLHVTLASGMEVSLSTEPHMAGGL
VSPALSRCNISLPSEHSPSLIEWRQRRDQARANYSTYERRLRAHNRNLLSIDFDPATRMG
KIYDDHRKFTLRILYDPQGRPVLWSPSSKYNEVNATYSATGQVTHIHRGNWSEKLEYDNG
KLVSRTWVNGKIWTYSFVEKSIMLLLHSQRRYIFEYDQTDRLLSVTMPSMVRHSLQSMLS
VGCYRNIYSAPDSRASVMQDYAQDGRLLQTLYLGTGRRTLYRYTKQARLSEILYDTTLVT
FTHNDSSGVVKTVHLTHEGFICTIRYRQIGPLVGRQIFKFSEEGLVNARFDYSYNNFRVT
SLQATINETPLPIDLYRYVDVSGRVEQFGKFSVIHYDLNQVITTHAMKHTKIFSAYGQVV
EVQYEILKSIAYWMTVQYDAWGRVTTCDIRVGADGNITRRSYEYDADSQLQTVLVNERPQ
WRYSYDLNGNINLLSQGASARLTPIRYDLRDRVTRLGEIQYRVDEDGFLRARGNDIFDYN
SNGLLTRVYNRVSERSVHYRYDGLSRRVASRSGDGQHHLQFFYADLADPTRVTHMYNHTS
AQITSLYYDLQGHIIAMEISSNEEYYVACDNTGTPRAIFNSRGRVVKEVLYTPYGDIYQD
SNPSFQLIIGFHGGLFDPQTKLVHFGRRDYDVVAGRWTTPNYDVFGELSRNPKPFNLYAF
KNNCPVGNIEEVTQFTTEIGSWLQLFGFQLHNVVPGFPKPDAAGMEQTYELMKMQTKTQD
WDSSKVVLGIQCELQRQLRNFISLDRLPMTPPVGSLEQCVSSTPSSDGPGGSPRFSALPS
IFGKGVRFAILRGLVAAEIVGVASEDSRRVATLLNGAMYLSGLRFTVDGRDTHHFLKPGA
VEDDLATLGGLSGGRVLENGVNVTVSQMTAVVGGRSRRFADIQLRHGALCLSVRYGATPD
EARQQLLEAARERAVEEAWARERRLLLAGEEGSRDWSEAEREQLRSVGRVAGYDGYFVLS
VEQYLELADSTNNIRFMRQSEVGRR
NT seq
8178 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatggattccaaaccgtaccagccactgtcgaaggcccgccatgagatggaa
atggcctacaccagctcgtcagacgagagcgaggacggccgccgcagggcgaagtcgtac
acgtccagagaaacgctcccggactatggccaggaactcaggctgaactacaacagccac
agcaagaggcagactacattcagcgaaacagctcaagaaattgactttgccaagacacag
ccccagatgctgggctccagctaccaggaggaactgtgcccgggcccccagctgggctac
tccctgggcatgggctcggacgtggaggaggacgaggtcgagggtgacccctcgcccagc
cacgctctccacctctggatgcaggaagtgaagtcggagcagagctcctgcctctccagc
cgtgccaactccgtgctgtcgctgaccgacaccgagcaggagcgcaagtccgacgctgag
aacgacaaccccagcagtccagccacacagttcaccttccgcccgttgccccccccacct
ccgccgccccacgcctgcacctgcgcccgccctgcgccctacgcccatgtgaccctgcag
cgcagcaccatgcccgcccagagccacgccagggacagggacggccagggcacagatggc
atcgggcagaacgacagctcacaggtcaaccgcaacaactgggtgctcaacagcaacatt
cctctggagactaggcacttcctgttcaagcacggctcgggctcctcgaccctgctgagt
gcggccaatcagaactacccgctgacctccaacacggtgtactctccgcccccgcgcccc
ttacccagaagcaccttctccagaccgatgttcacgttcaacaagccctacaagtgctgc
aactggaagtgtacggccctcagcgcctcggccatcacagtcaccctcgccctgctcctc
acctacgtcatcgcggtgcacttgttcggtctgacctggcacctgcgccctgccgacccg
cagctgtatgagaacggggtgagcaaactgaaccggccgccggacaccagcctggccacc
ctcccccctcttgaaggcctcggccctgacaagagcccccgcgtgaaaggagaaaagtta
cagcgtggccgtgccatagacaggggcgaggtggacatcggtgctcaggtgagccaggta
atcccacccagcctcttctggaggttccacctgaccgtccaccaccccacctacgtcaag
ttcaacctctccctctcacgtgaagccctcctaggggtgtacggcagaagaaacctcccg
cccacccacacccagtttgactttgtgaagctgctggatggaaagcacctcctgaaggtg
gagccgaagggcccggagaccccagggcctggaccgggcatgggatcaggccctcggaac
cagcctctgagcggactgcaggagacgggcttcatcgagtacatggaccccggcacctgg
cacctggctctctacaacgacggcaagaagatggagaccgtactcatcctcagcaccccc
atcgacaccatggatggctgctccaccagctgcaatggcaatggagagtgtgtggctggt
cactgccactgcttccctggtttcttgggaccgaactgtgagaaagacacgtgcccggtg
ctgtgcagtggtaacggcgagtacgagaagggccggtgcgcgtgccacgccggctggaag
ggccccgagtgcagcatccaggaggaccagtgtgtggaccccacctgctccaaccacggc
acgtgcgtgcagggcatctgcatctgtgtgcccacctacaagggcaacaactgcgaagag
gtggactgcctggaccctcagtgtgctggccacggtgtgtgtgtgcgtggcgactgcctg
tgctcgccgggctggggcgggctcagctgcgagagccctctgcccacctgccaggagcag
tgctcaggccacggcacctacctgcctgacaccggaacctgcacctgccaacccaactgg
accggcgccgactgttacattgaggtgtgcccagtggcgtgtggcagccatggcgtgtgc
acggagggccagtgccagtgtgaggagggctgggaggggctggcgtgtgaccagcgggcg
tgccacccgcgctgcgaagagcacggccagtgtcgcgatggcaagtgcgagtgccacccc
ggctgggagggagagcactgcaccatagcccatgactttgacgacgtcgtgaaggacgga
tgcccggggctgtgtaatgggaacgggcgctgtaccctcgagcagagtggttggcactgc
gtgtgccagactggctggagtggcccgggctgtaacatcatcacggagagggagtgcgac
gacaacatggacaacgatggagacggcctgctggactgtgtggaccctgactgctgtgag
gcgatggtgtgcagtgcgagtcctttgtgccagggctcccccgatcccggggctctctcc
tgcagcagggccagaccccccctcggccctccgccccccagaaccttcttccagcgcgtc
cacttcctcctgggcaagaccggcacacacacgctacacggagacatcccattcgacagg
agtcaagtggctgtggttcgaggacaggtggtggcagtggatgggacgcctctggttggc
gtaaatgtgactttcttccagcaccctgaatatggctacaccatcagtcgacaggatggc
agttttgaccttgtcactgccggagccatttcagtaaccctggtgttccaaaggcctccg
ttcctcatgcagcgacgcaccgtctggttgccgtggaacagcttcatggtgctggacaag
gtcgtcatggcgaggactgaggttgtggccccggtctgtgacatcacaagctttgtgagt
ccgtacccagtggtcctgccgtcacccctgaccaggtacacgggcgagtgtgttgcccgg
ggcccagtcatcccagaactacaggccgtccaggaggagattgtgatcccgggcagcttt
gtgaagctcagctacctcagcacgcgcacggcgggctaccagtcgctgctgcggatcatc
ctcacgcacgcctccatgcccgccggcctcagcaaggtgcacgtgtcggccgccatcgag
ggccgcctctaccagaagtggtacccggcagcgccaggcctggtctacgtgctcgcctgg
aacaagaccgacatctacggacaggaggtgtggggactcacagaggctattgtgtccgtg
ggctatgagtatgactcatgtccagactttattctgtgggagcggagaacggccctaatc
cagggatttgagatgatgggctccaatctgggcggatggtccctggacaaacaccacgtc
ctcaacctccagagtggcatcctccacaaaggcaacggcgagaacctcttcatctcccag
cagcccccagtcattaccacggtgatgggcaacggctactaccgcaccattccatgcatg
ggctgcagcgggccggcggtccaaagcaagctgttcgcgcccgtggcgctcgcctgcggc
tccgacgggagcgtctacgtgggcgacttcaactttgtccgccgcattctacccagtgga
cacacctacaacatcctggagctcaagaatcgggacacaaggcacagcacgagtcctgct
cacaagtattacctggccttggatcccgtgcacgagaccctctacctgtccgacaccagc
agtaggaaagtgttccgactgaagaccctgagcgaaccgcgggacccagtacggaacatg
gaggtggtggcgggcaccggtgaccagtgcctcccgttcgaccagagccactgtggagaa
ggaggcaaggccactgcagcctccctcaacaaccccagagagttggatccgccgctcagt
ctgatcaaaagagctgaggattggctctgcagctccagtggagtgagactagaatggccc
accgacctggccgtcaaccccatggacaactccctctacatcctggacaacaacatcgtt
ctgcaggtctcggagagcctacaggtgcgcatcgttgccgggcgacccatccactgccag
gtgccaggcatagaccactacctggtcagcaagtcggccgtccactccacactggaggcg
gccaaggccatcgctgtgtcgcagtacggcgtcctgtacatcgccgagacggacgagcgc
aagatcaaccgtgtccagcaggtcaccacgaatggcgagatctctgtcattgctggagcg
cccgctgactgtgactgcaagatcgaccccaactgcgagtgcttctcaggagatggaggc
tatgcccgcgacgcccgcctggaggccccctccgccctcacagtctcgcccaacggcacg
ctctacatcgccgaccagggcaacatccgcatccgggcggtgagcgccaaccgcccgcgt
cccacgcccgccggcctctacgaggtgccctcgctgcccgaccaggagctgtacgtgttc
agctccaacggcacgcacctgcacacgcgccacctcatcaccggcgacttcctgcacaac
ttcacctacgactcggccgaggggcgcctcagcgccgtggtggccagcaacggtcaggcc
gtgcacgtgaggcgggagggaggagcaggcggaggaggaggaggtggtggcagtggtggg
agtggtggtggtggagcccccttgtggctggtggtgcccggcggccaggtgttctggctg
agcgtgagcttggcgggcggccgggcgctgaagcgagtgtcggcacagggacacgacgtg
gcgcacctgtcgtaccacggcggcacgggtctcctagcaaccaagagcaacgagaacggc
tggaccactgtctacgaatacaacagtgagggccacgtcatcaacgtcaccttccccacg
ggggaggtcaccagttaccatggcagcatggagaaatccgtacgggtggaggtggacagc
tccaactccgagaactttgtcaccgccaccaacttctccgccaccgacaccatcttcacc
ttccgccaagaccacgctcagaacagctaccgcgtgagcgcggacggctcgctgcacgtg
acgctggccagtggcatggaggtgtccctgagcacggagccacacatggccggcggcctg
gtcagcccagccctcagccgctgcaacatctcactgcccagcgagcacagccccagcctc
atcgagtggcgccagcgaagagaccaggcccgcgccaactactccacctacgagaggaga
ctcagggcccataaccgaaaccttctctccatcgactttgacccggccacacggatgggc
aagatctacgacgaccaccgcaagttcactctgcgcatcttgtacgatccccagggccgg
ccggtcctgtggtcacctagcagcaagtacaacgaggtcaacgccacctactctgccacg
ggtcaggtgacccacatccaccgcggcaactggtccgagaagctggagtacgacaacggc
aagctggtgtcgcgcacgtgggtcaacggcaagatctggacatactcatttgtggagaag
tccatcatgctcctcctgcacagccagcgacgctacatcttcgagtacgaccagacggac
cggctgctctcagtcaccatgcccagcatggtgcgccacagcctgcagtccatgctgtcg
gtgggctgctaccgcaacatctacagtgcgccggacagccgcgcctccgtgatgcaggac
tacgcccaggatggacgcctgctgcagacgctctacctgggcacaggccgccggacgctc
taccgctacaccaagcaggcgcgcctctccgagatcctctacgacaccacactggtcacc
ttcacgcacaacgactcgtccggcgtggtgaagaccgtccaccttacacacgagggattc
atctgcaccatccgctacagacagataggtcctcttgtgggacggcagatcttcaaattc
agcgaggaggggctggtgaatgcccgctttgactacagctacaacaacttccgcgtgacc
agcttgcaggccaccatcaatgagacgccactgcccatcgatctctaccgctacgtggac
gtgtctggccgcgtggagcagttcggcaagttcagcgtcatccactacgacctcaaccag
gtgatcaccacgcacgccatgaagcacaccaagatctttagcgcctacgggcaggtggtg
gaggtccagtacgagatcctgaagtccatcgcctactggatgacggtccagtacgacgcc
tggggccgcgtcacaacctgcgacatccgcgtgggtgccgacggcaacatcacgcggcgc
tcatacgagtacgacgccgacagccagctgcagacggtgctggtgaacgagcggccacag
tggcgttacagctacgacctgaacggcaacatcaacctgctgagccagggcgccagtgcg
cgcctcacgcccatccgctacgacctgcgcgaccgcgtgacgcgcctgggcgagatccag
taccgcgtggacgaggacggcttcctgcgggcgcgcggcaacgacatcttcgactacaac
tccaacggcctgctcacgcgcgtctacaaccgcgtgtcagagcgcagcgtccactaccgc
tacgacgggctgagccgccgcgtggccagccgctcgggcgacggccagcatcacctgcag
ttcttctacgccgacctggccgacccgacgcgcgtcacgcacatgtacaaccacaccagc
gcccagatcacctcgctgtactacgacctgcagggacacatcatcgccatggagatcagc
agcaacgaggagtactatgtggcgtgcgacaacaccggcacgccccgggccatcttcaac
agccgtggtcgggtggtgaaagaggtcctctacacgccctacggggacatctaccaggac
tccaacccctccttccagctcatcatcggcttccacggaggcctgttcgacccgcagacc
aagctggtgcacttcggccggcgggactacgacgtagtggccggccgctggaccacgccc
aactatgacgtctttggagagctcagccgcaaccccaagcccttcaacctctacgccttc
aaaaacaactgtccggtcgggaacatcgaggaagtcacacagttcacaacagaaattggc
agttggctgcagctcttcggtttccagctccacaacgtggtgcccggtttccccaagcca
gacgcggcgggcatggagcagacgtacgaactgatgaagatgcaaaccaagacccaggac
tgggactccagcaaggttgtcctgggcattcagtgtgagcttcagcgccagctgcgtaac
ttcatctctctggaccgtctccccatgacgccccctgttggctcccttgagcagtgcgtc
tcatccaccccctcgtccgacggacccggtggcagcccgcgcttctctgccctgccgtcc
atctttggcaagggtgtgcgcttcgccatcctgcgcggcctggtggcggccgagattgtg
ggcgtggccagcgaggacagccgtcgcgtggcgacactcctgaatggcgccatgtacctg
tcgggcctgcgcttcaccgtggacggccgcgacacgcaccacttcctcaagcccggtgcc
gtcgaggacgacctggccacgcttggcggcctgagtggcgggcgcgtgctggagaacggc
gtcaacgtcaccgtctcacagatgaccgccgtggtgggcggccgcagccgccgcttcgcc
gacatccagctgcgtcacggcgcgctgtgcctgagcgtacgctacggcgctacgccggac
gaggcgcggcagcagctgctggaggcggcacgggagcgggcggtcgaggaggcctgggca
cgtgagcggaggctgctgctggccggcgaggagggcagccgcgactggagcgaggccgag
cgagagcagctgcgcagcgtcgggagggtggccggttacgacggctacttcgtgctgtct
gtggagcagtacctggagctggccgacagcaccaacaacattcgcttcatgaggcagagc
gaggtgggacgcaggtaa
DBGET
integrated database retrieval system
