Alosa sapidissima (American shad): 121694947 Help Entry 121694947         CDS       T11137                                  Symbol pcdh12 Name (RefSeq) protocadherin-12   KO K16499   protocadherin delta 2 Organism asad  Alosa sapidissima (American shad) Brite KEGG Orthology (KO) [BR:asad00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:asad04515]     121694947 (pcdh12) Cell adhesion molecules [BR:asad04515]  Cadherins   Protocadherins    121694947 (pcdh12) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_2 Cadherin_CELSR2_9th Motif Other DBs NCBI-GeneID:  121694947 NCBI-ProteinID:  XP_041931293 LinkDB All DBs Position 20:21682700..21699531 Genome browser AA seq 1197 aa AA seqDB search MLAQSLNQALVLVLVFCLECRAQSFDSTPHTITYRVLEEQEAGTKVGRLVDDLRQRGEQG SLEDFQVAGHGQALPFAVSARGGEVSTLRRLDREELCRGVDHCEIAFNILYRKAGVMDFL HVRVEVMDLNDHSPTFPSLRQDVEISETAALGMRIPLERAVDLDAGPNGLQTYSMSVSQH FALDVKSGSGGTKQAELIVTKELDREELSSIDITVLAFDKGNPPRSGMTIVTVNILDSND NSPVFEDGAPSVVLPEDTSRGTVVIKLRATDPDEGANGEIEYSLSKHAPADVQRIFSVHP QTGAVTLVGPLDYEEKDTYEVDIQARDLGPNGIPSHCKLQVKLRDVNDNAPRIHVTWTPP DSPVATVSEGAPNETFLALVMVSDADSGENGEVRAHIQHGSGHFRLKNIHGDNYMIVTNG TLDREKTMEYNLTLFARDNGQPSLSCFRHITVRVLDENDNAPVFSKTHYRAIFKENNKAG FQVLAVEASDVDLDLSGKVSYSIHESNDLSTPSFSFSVHPTTGVVTVQQSLDFEESRIYT FVVQAIDHGHPPLTSSATVIIELQDDNDNYPEINEPPPKGGVAKVSVPVNAEKGEVVAEM GEVNERPLYLPTNRTSARKHQGYLATTIKAHDPDSGLNGKIHFRIVDGNPSRLFWLDTKT GQLYVNTTNATDLIGKTFKVGIAVSDMGIPVLVTRTTLEVSFINLLDHLKNSAPGQKAQL SFTMLMAICLGASCLLLLLAVALVTTFCRQEKRDNHAYNCRQAESTYTRHPRRPQKHIRK TDIQLVPVLRGRRDDPPEDEAQPLSSGAPPSPAELHVDGQFCRTPATSRSAHAMPDPNMT FQHNQTRTLRKPGNIELDGPTPHTPGMPYRTLRKARNPSSSTTSSLSQAGTLNRHHANSE VHSGTLEGQKGNLSPAVSQATLRRPKNTDSLSRQAEDDHRQMLRNLVRLSMAAFGGDSPI ELSSASPEVQQVSQLLSLLHQGQFQPRPNFRGNKYSHRTGRLGAPDADWLSTKDSGRGES EAGDVDWEPGRDSPVDPLLEEGLNNLLNSADDVFADVQDPGWIARLSLPLAGDWHENVFI PDGPQSPDDRGRSGSQGGPGDDSVSPSSFSTFGKSPEKAGPLGGALLSEVSTLFEMLLTQ KADAQPRPSAEMLYRLSAAYRRSLGLDTPPPGGAPGSSARRPAGSDKLAAPSMHSSG NT seq 3594 nt NT seq  +upstreamnt  +downstreamnt atgctggcccagtctctcaatcaagcgttggttctggttctggtattttgtttggagtgt cgggcccagtctttcgactcgactccccacaccatcacataccgtgtcctggaggagcag gaggctgggacgaaggtgggccgtctggtcgacgacctgcgtcagcgaggggagcagggg tcactggaggatttccaggtcgcagggcacggacaagccctgcccttcgccgtgtcggcg cggggaggtgaggtgtcgacgcttcgccggctggaccgggaggagctgtgccgcggcgtt gaccactgtgagatcgccttcaacatcctctacaggaaggcaggcgtgatggacttcctg catgtgcgcgtggaggtgatggacctgaacgaccacagccccaccttccccagcctcagg caggacgtggagatctccgagacggccgcgctcgggatgaggatcccgctggagcgggcc gtggacctggacgctggtccgaacggcctgcagacctactccatgtccgtcagccagcac tttgccctggatgtgaagagcgggagcgggggcaccaagcaggccgagctgatcgtaacc aaagagctggaccgggaggagctgtcctccatagacatcacagtcttggccttcgacaag ggcaaccccccaagatctggcatgaccatcgtgacagtcaacatcttggactccaatgac aacagtccggtgttcgaggacggagcgccctcggtggtcctcccagaggacaccagccgt gggacagtggtcatcaaacttcgtgccacagaccccgatgaaggagccaatggggaaatc gagtactccctgagtaagcatgccccagcggacgtccaaaggattttcagcgtgcacccc caaactggggccgtgaccctggttggacccttggactatgaggagaaggacacgtacgag gtggacatccaggcccgggacttagggcctaatggcatcccttcgcactgcaagctacag gtcaagctacgagacgtgaacgacaatgctccgaggatacatgtcacctggacgccacca gattcgccagtggccaccgtgtccgagggagcgcctaacgagacgttcctggccctggtc atggtttcggacgcagattctggcgaaaacggtgaggtgcgtgctcacattcaacatgga tcgggacactttcgcctcaagaatattcacggagacaactacatgattgtcactaatggg acattggatcgggagaaaacgatggaatataatttaacgcttttcgctcgggacaatggg cagccctcgctgtcttgttttcgccacataactgttcgcgtattggatgaaaacgacaac gctcccgtcttctccaagacccactacagagccatcttcaaggaaaataacaaagccggt ttccaagttctcgccgttgaggccagtgatgtggacttggatctcagtggcaaggtgtct tactctattcatgagtccaatgatctcagcacgccctcgttctccttctcagtccatccc accactggtgtggtcacggtccagcagtctttggactttgaggagtcccgcatctacact tttgttgtgcaggccatcgatcacggtcaccccccgctcaccagcagtgccacagtaatc atcgagctccaggatgataacgacaactaccctgaaatcaacgagcctcctcccaagggg ggtgtggccaaggttagtgtacctgtgaatgcagagaaaggggaggtcgtggcggagatg ggcgaggtgaacgagaggccactttacctccccaccaatcggacctcagcacgtaaacat cagggctacttagccactaccatcaaagcccacgatccagattcaggcctgaatggaaaa atccattttcggattgttgacgggaacccttctcgcttgttctggctggacactaaaaca gggcaactgtacgtgaacaccaccaatgccactgacctcatcggcaagacgtttaaagta ggcattgccgtgtcggacatgggcatcccagtgcttgtcacccggacaactctggaagtc agtttcatcaaccttttggatcacctgaagaactcagcccctggtcagaaggcccagctg agcttcaccatgctgatggccatctgcctgggcgcctcttgcctgcttctgctgttggct gtcgccctggtgaccaccttctgtcgccaggagaaacgcgacaaccacgcctacaactgc aggcaggcggagtcgacctacacgcgccacccgcgcaggccccagaagcacatccgcaag acggacatccagctggtgccagtcctgagagggcgcagggacgaccccccggaggatgag gcccagccgctctcctctggagctccgccgtctcccgcggagctccacgtcgacggccag ttctgccggacgccggccacctcccggtcggcccacgcaatgccagatcccaacatgacg tttcagcacaaccagaccaggaccttgcggaaacccggaaacatcgaactggacgggccc accccccacacccctggcatgccataccggaccctccgcaaggcgcggaacccctcctcc tccaccacctcttcgctctcccaggcaggaactctgaatcggcaccacgccaactcagag gtgcattctgggacactggagggccagaagggaaacctgtccccggccgtatcccaggca acgctgaggaggcccaagaacacggactccctcagcaggcaggctgaggacgaccacagg cagatgctgaggaacctggtgcgcctctccatggctgccttcggtggggacagccccatt gagctgtcgtctgcctcccctgaagtacagcaggtctctcagttgctctcgctcctccat cagggacagttccagcccagaccaaacttccgagggaacaagtactctcaccgcaccggc cggctgggcgcgccggacgctgattggctgagcactaaggacagtggccgcggggagagt gaggctggagacgtggactgggagccgggtcgggattcgcccgtggaccccctcctggag gagggcctcaacaacctcctcaacagcgcagatgatgtgtttgcggatgtgcaggaccct ggctggatcgctcgcctctccctcccactggccggcgactggcacgagaacgtcttcatc cccgacgggccgcagtcccccgacgaccgtggccgcagtggctcgcagggcgggcccggc gacgactcggtctcgccctcctccttctccacgttcggcaagtcgccggagaaggcgggc ccgctgggcggagccctgctgtcggaggtcagcacgctgttcgagatgctgctgacgcag aaggccgacgcccagccgcggccctccgctgagatgctctacagactgtccgctgcctac cgccgctccctcggcctagacaccccaccaccagggggcgccccaggctcatctgcacgg cgccctgccggcagcgacaagctggccgctcccagcatgcactcctctggttaa

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