Alosa sapidissima (American shad): 121694952
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Entry
121694952 CDS
T11137
Symbol
prom1a
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asad04147
]
121694952 (prom1a)
04090 CD molecules [BR:
asad04090
]
121694952 (prom1a)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121694952 (prom1a)
CD molecules [BR:
asad04090
]
Proteins
121694952 (prom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
Sigma54_AID
DUF3587
Motif
Other DBs
NCBI-GeneID:
121694952
NCBI-ProteinID:
XP_041931307
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Position
20:complement(21926937..22000221)
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AA seq
897 aa
AA seq
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MAWKAGLLLLCWGLTSGEVDVQAAEPESPSSPARTLDFGYVPAGVYETVAHYEPGPIGIL
FHMVHAFLYVVQPNPFPEDLVIRVAKDKFGAIQSEYQKPENIVLTLQVIYYEMGFVVCVL
LGVIFLVLMPLVGLLFCLCRCCDNCGGEMHQRQRKNADCQRGLLATLLFSTCIVITAGIL
CSYAANQHLSSQLKQMRRLVNSNLRDLHTFANETPTQIEYLISQYSTAKNQVLFDLENIG
PLLGGRIHEELGKEVRPALDGALNMAGAMHETKEALENVSMTLEVLQDGAGKLRFNLSLV
RSGLNTSLDDPVCTVPGSPAAKVCSRVLTSLSQLHVGANYSELPSVTPQLEKVNEALKTD
LSGIVQKGYSSFNDTPAMVADQTRNVVEGVRDMLDGIGTNITGFSKLFPMHNSLTNFTIL
ISHGHSRIEDLYPEIDRYDFYRWTVCITLCCMVVMVLAFNLLGMLCGILGFDRHATPTTR
GCISNTGGNLLMAGVGFSFIFSWILMAVVAVSFLVGGNVEKLVCEPFHTKQLFKVLDTPH
LIMPAWKNFIPGYLYNDPEMDLTVESFYSNCKENRGIYSALHLDKIFNVSAFLNTSVFTE
DVAHVIDGVKVDLRGIILLESEGKDNLVRFTETGIGDINYADYLEEVNKRVTLVDLLSFA
KELDAQSEELPKGSLQTSLKGHASTLRQIHTQQVLPMEQSLKYVRARTTLSQSIRMLQMT
SRELPSKVSTVLNTIEAAQYLISHNATFVVSQEIERYKQTIIGYFRQYINWVKASLALEV
APCKPFSNIVDTMEIVACSFLIDSMNTFWLGLGGATLFLLPSLILAVRLAKFYRRMDTED
VYDDFETIPMKTMEIGYNGYHNERLRSIANPIMRSLPAYDTMTRFPRASAPPRHADW
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcttggaaagcgggactgctgctcttatgctgggggttgacgtctggcgaagttgac
gtccaagcagcggaaccagagagcccctcatctccagcaagaactttggatttcggctac
gttccagccggagtttacgagaccgtggcccactatgagccggggccgatagggattcta
ttccacatggtccatgctttcctctacgttgtccagcccaatccattccctgaagatctc
gtcatcagagtggcaaaggataaatttggggcaatccagtcagagtaccagaagccagag
aacattgttctcactcttcaggtgatctactatgagatgggctttgtggtatgcgtgctg
ctgggggtgatcttcctggtcctgatgccactggtgggcctgctcttctgtctgtgccgt
tgctgtgacaactgtggcggcgagatgcaccagcgccagcgcaagaacgccgactgccag
agaggcctgctggccaccctgctcttctccacctgcatcgtcattactgctggaatcctg
tgctcgtatgcggccaatcagcaccttagttcccagctgaagcagatgaggcggttggtc
aacagcaacctgagggacctgcacacgtttgccaacgagacgcccactcaaatcgagtac
ttgatctcccagtattccaccgctaagaatcaagtgctgtttgacctggagaacatcggg
ccactactgggagggaggatccatgaggagctggggaaggaggtgcgacctgctctggac
ggagctctcaacatggctggagccatgcacgagacgaaggaggccctggagaacgtcagc
atgaccctggaggtgttgcaggacggggccgggaagctgcgcttcaacctgagcctggtg
cgctcgggcctcaacacctcgctggacgaccccgtgtgcaccgtgcccggctcgcccgcc
gccaaggtctgcagccgcgtgctgacctccctcagccagctgcacgtcggagccaactac
tccgagttgcctagcgttactcctcagctggagaaggtcaacgaggccctgaagacagac
cttagcggcatcgttcagaaggggtactcatctttcaatgacacgccagccatggtggcg
gatcagactaggaatgtggttgaaggtgtgcgtgacatgctggatggcattggcacgaac
atcactggtttctctaagctgttccccatgcacaactccctgaccaacttcaccatcctc
atcagccacggccactcccggatcgaggacttgtaccccgaaatcgaccgctacgacttc
tacaggtggacggtgtgcatcaccctgtgctgtatggtggtgatggtgctggccttcaac
ctgctgggcatgctgtgtggcatcctgggcttcgaccgccatgccacccccaccacccgc
ggctgcatctccaacaccgggggcaacctgctcatggcgggcgttgggttcagcttcatc
ttctcgtggattctgatggccgtggttgctgtcagcttcttggtgggtggcaacgtggag
aagctggtgtgtgagccctttcacaccaaacagctgtttaaggtgttggacacccctcac
ctcatcatgcctgcctggaagaacttcatccctggctacctgtacaatgaccccgagatg
gacctgactgtggagagcttttacagtaactgcaaagaaaatagggggatctactccgct
ctacatctggataagatcttcaacgtctctgccttcctgaacaccagtgtgttcacagag
gacgtggcccatgtgattgacggcgtgaaggttgacctgaggggcatcatccttctggag
tcggagggcaaagacaacctggtccgcttcaccgagactggtatcggcgacatcaattac
gcagactacctggaagaggttaacaaaagggtcactctggtggatctgctgtcgttcgcc
aaggagctggacgcccaaagcgaggaactgccgaagggctccctgcagacgtccctgaag
ggccacgccagcaccctccgccagatccacacccagcaggtcctccccatggagcagtca
ctgaaatatgttagagcgaggaccacgctgagccagagcatccgcatgctgcagatgacc
tccagagagctgcctagcaaagtttctaccgtcttgaataccatagaggcggcccaatat
cttatctcccacaatgcaactttcgtggtcagtcaggaaatagagagatacaaacaaacc
attattggatacttccggcagtacatcaattgggttaaggcctcactggctctggaggtg
gccccttgcaagcccttcagcaacattgtggacacgatggagattgtggcctgcagcttc
ctcattgactcgatgaacaccttctggttggggctgggtggtgccactctcttcctgctg
cccagcttgatcctggccgtgaggctggccaagttctaccgcagaatggacacggaggac
gtctacgatgactttgagacaatacccatgaaaactatggaaattggttataatggttat
cataatgagcgtttacgaagtatcgcaaacccaataatgagaagcctcccagcctacgac
acaatgactagattcccacgagcctcggcgcccccccggcacgctgactggtga
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