Alosa sapidissima (American shad): 121695129
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Entry
121695129 CDS
T11137
Symbol
thrb
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
asad04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121695129 (thrb)
04081 Hormone signaling
121695129 (thrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121695129 (thrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
asad03310
]
121695129 (thrb)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121695129 (thrb)
Nuclear receptors [BR:
asad03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
121695129 (thrb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
121695129
NCBI-ProteinID:
XP_041931589
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Position
21:767058..947553
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AA seq
415 aa
AA seq
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MSEHADKGSPGWKHEALQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEAKCIIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEEN
RERRKREEIQKTVWDRPEPTPEEWELIRVVTDAHMATNAQGNHWKQRRKFLVEEAMLLNE
ITCNLFCAPDQSAVGVKDSKPEDIGQAPVVNTAEGSKVDIEAFSQFTKIITPAITRVVDF
AKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGL
GVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGLTSVERIERCQEGFLQAFEHY
INYRKHKVAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcacgcagacaaaggcagcccgggctggaaacatgaggccttgcagaatggg
tacataccaagttacctggacaaggacgagctgtgtgttgtatgtggggacaaagccacc
ggctaccactaccgctgcatcacctgtgaaggctgcaagggattcttcaggcgaaccatc
cagaagaacctgaacccgacgtacgcctgtaagtacgaggccaagtgcatcatcgacaag
gtcacccgtaaccagtgccaggaatgccgcttcaagaagtgcatcgccgttggcatggcg
acggacttggtgctggacgacagcaagcgtctggcgaagcgcaagctgatcgaggagaac
cgcgagcgacggaagcgcgaggagatccagaagacggtgtgggaccggccggagccgacg
ccggaggagtgggagctgatccgtgtggtcacggacgcccacatggccaccaacgcccag
ggcaaccactggaagcagaggaggaagttcctggtggaggaagctatgctacttaatgaa
ataacatgtaatttattctgtgctcctgaccagagtgcagtgggggtgaaagactcgaag
cccgaagacattggccaagcaccggtcgtcaacaccgcggaggggagtaaagtggacata
gaggccttcagtcagtttacaaaaataatcacccccgccatcacacgcgtggtggacttc
gccaaaaaactgcctatgttctgtgagctgccttgtgaggaccagatcatcctgctgaaa
ggctgctgtatggagatcatgtctctgcgggcggcggtgcgctacgaccctgagagcgag
acgctgacgctgaacggcgagatggccgtgacgcgtggtcagctcaagaacgggggcctg
ggcgtggtgtccgacgccatcttcgacctcggcgtgtccctgtcctccttcaacctggac
gactcggaagtggccctgctgcaggccgtcatcctcctgtcctccgatcgtccaggcctg
accagtgtggagcggatcgagcgttgccaggagggcttcctgcaggcctttgagcactac
atcaactaccgcaagcacaaggtggcgcacttctggcccaagctgctgatgaaggtgacg
gacctgcgcatgatcggcgcctgccacgccagccgcttcctgcacatgaaggtggagtgc
cccacagagctcttcccccctctcttcctggaggtgttcgaggactga
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