Alosa sapidissima (American shad): 121695191
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Entry
121695191 CDS
T11137
Symbol
top2b
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 2-beta
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asad03032
]
121695191 (top2b)
03036 Chromosome and associated proteins [BR:
asad03036
]
121695191 (top2b)
Enzymes [BR:
asad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
121695191 (top2b)
DNA replication proteins [BR:
asad03032
]
Eukaryotic type
DNA Topoisomerases
121695191 (top2b)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
121695191 (top2b)
Centrosome formation proteins
Centriole proteins
121695191 (top2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
121695191
NCBI-ProteinID:
XP_041931708
LinkDB
All DBs
Position
21:262868..330242
Genome browser
AA seq
1632 aa
AA seq
DB search
MSNGAAGSGGLTWVTLFDKNNASKKEEANGHGDGPRSEGGKKDAGGKKDAGEKGSKKDAS
KKMSVERVYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDDEIGMNTREITFVPGLYKIF
DEILGNDAADNKQTRQEHVHHQKSTLDPESNVVSIWNNGKGIPVVEHKEEKMYVPALIFG
HLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWQNNMTKTSD
PKIKFFDGDDFTCVTFQPDLSKFKMEKLDKDIVALLTRRAYDIAGSCKGVKVMLNGKKLP
VTGFRSYVDLYVKDKLDETGVTLKVVNESVNERWEVCLTLSEKGFQQISFVNSIATTKGG
RHVDYVVDQIVSKLIEVVKKKNKAGVNVKPFQVKNHIWVFVNALIENPTFDSQTKENMTL
QTKSFGSKCQLSEKFIRSATNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDD
ANDAGGKHSSECTLILTEGDSAKTLAVAGLGVIGRDRYGVFPLRGKILNVREATHKQIME
NAEINNIIKIVGLQYKKSYEDPESLRSLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPS
LLKHTFLEEFITPIVKVTKNKQEMSFYSIPEFDEWKKQTENFKTWHIKYYKGLGTSTGKE
AKEYFADMERHRIMFRYAGTEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQ
YLYGTQTKYLSYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCVKRNDKREVK
VAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINILQPLGQFGTRINGGKDAASP
RYIFTMLSPLAKLLFPAVDSSLLKFLYDDNQKVEPEWYIPIIPMVLVNGAEGIGTGWACK
IANYDPREIVNNIYRLLNGQDPMPMLPKYKNFKGVIHELGQNQYLVSGEVSVLDKNTIEI
TELPVRTWTQAYKESVLEPMLQGTEKTPALITDYKEYHTDTTVKFVVRMSEEKLAQAEAA
GLHKVFKLQSSLTCNSMVLFDHMGCLKRYDSVQDILKEFYELRLHYYKLRKDWLMGSLGA
EAAKLSNQARFVLEKIEGKISIENKSKRELIRMLVQRGYESDPVAAWNRAQEKVLEEDDG
GGDSDGSLDSSSSSGPNFNYILNMPLWCLTKERVDELLKQRDAKKAELNELQRKSREDLW
KEDLAVFIQELDRVEEQEKETVQLGKAAKMVKGKVGKPKARKMELEETLPSPYGRRVEPP
LSLSVKADAAKKASRKKKGELDVKLEGDEDGEATGENSLISPSGLGAAPAKPKTPRVKKE
KKEPSTPREKKTPTPKGSSSKKVKKRNPWSDDDSKSDSDLDESEPVIPRETQSKRASAVK
AKYTFDFSEEEDRGDDGDDDQDEDGRSSPVRSYGDSFSTSQSKEPYNNNTNEEDDDDEDD
IFPPKQSFTPSAPATKKKEPAKSSKSAFSDTVRLSSDSDGGKSDSDDGNGPSVFSSFSSS
SVFDKSTPAKKAKKPTESVPKPKKTPAKTKPKPDTSLWESDSDTGAKKSTPALKGKGRGK
KRKQSDSEGDDYSPMKKAGKTPTPSRQKKKPSSDDEDESFSRSDPSRDRPGRSRKEVRYF
AESDDGEDDMFD
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggagctgcaggaagcgggggtttgacttgggtgaccctgtttgacaagaac
aacgcgagcaagaaggaggaagccaatgggcacggcgacgggccccggagcgagggtggc
aagaaggacgcgggtggcaagaaggacgcgggagagaagggcagcaagaaggacgcgtcc
aagaagatgtccgtggagcgcgtgtaccagaagaagacccagctggagcacatcctactc
cgtccagatacctacatcggctctgtggagcctgtcacgcagcaaatgtgggtttttgat
gatgagatcggcatgaacacgcgagagatcaccttcgttccaggattgtacaaaatcttt
gacgagattctgggtaatgacgcagcagacaataagcaaacgagacaagaacatgtccac
catcaaaaatcaacattggaccccgagtccaacgtagtgtccatctggaacaacgggaag
ggcattccggtggttgaacacaaagaggagaaaatgtacgtccctgccctcatcttcggc
cacctcctcacctccagtaactatgacgacgacgagaagaaggtcacaggtggcaggaat
ggatatggtgccaaactctgcaacatcttcagcaccaagttcaccgtggaaacggcgtgc
aaagagtacaagcacagcttcaaacagacctggcagaacaacatgacaaagaccagtgac
ccaaagatcaagttctttgatggggatgacttcacgtgcgtgacgttccagcccgatttg
tccaagttcaagatggagaagctggacaaggacattgtggcgctgctgacgcgcagggcc
tatgacatcgccggctcctgcaaaggcgtcaaagtcatgctcaatggaaagaagcttccg
gtgaccgggttccgcagctacgtggacctgtatgtgaaggacaagctggacgagacgggc
gtgaccttgaaggtcgttaacgagtcggttaacgagcgctgggaagtgtgtctgactctc
agtgagaagggcttccagcagatcagcttcgtcaacagcatcgccaccaccaagggcggc
agacatgttgactatgtcgtggaccagattgtatcaaagctcattgaggtggtcaagaag
aaaaataaggcgggtgtcaacgtgaaacccttccaggtgaagaaccacatctgggtgttt
gtgaacgctctgatcgagaaccccacctttgactctcagaccaaggagaacatgacgctt
cagaccaaaagcttcggttccaaatgccagctctccgagaagttcatccgctcggctact
aactgtggcattgtggagagcatcctgaactgggtgaagtttaaggcccagacgcagctc
aataagaagtgttcctccgtcaagtacagcaagatcaaaggcatccccaagctggacgac
gccaacgatgcaggggggaagcactcgtcggagtgtactctgatcctaactgagggagac
tcggcgaagacgctggctgtggcgggccttggggtgatcggacgcgaccgctacggtgtt
ttccccctcaggggcaagatcctcaatgtgcgagaagccacacacaagcagatcatggaa
aacgctgagatcaacaacatcattaagatcgtgggtctgcagtacaagaagagctacgaa
gaccccgagtcactgcgctcgcttcgctacggcaagatcatgatcatgacagatcaggat
caagatggttctcacatcaaaggtcttctcatcaacttcttccaccacaactggccttcc
ctgctcaaacacaccttcctggaggagttcatcacgcccattgtcaaagtgaccaagaac
aagcaggaaatgtccttttacagcattccagagtttgatgagtggaagaaacagacagag
aacttcaaaacatggcacataaagtattacaaaggtctaggaaccagcaccggtaaagag
gcaaaggagtactttgcggacatggagagacatcggatcatgttccgctacgcgggcaca
gaggatgatgctgccatcacactggccttcagtaagaagaagacggatgacagaaaggag
tggctgaccaacttcatggaggacagacgccagagaaggatgcacggcctgcccgagcaa
tatctctacggaacccaaaccaagtacttgtcctacaatgacttcatcaacaaggagctg
atcctgttctccaactccgataatgagcgctctattccctccctggttgatgggctgaag
ccgggccagaggaaggtgctgtttacctgcgtgaagaggaatgacaaaagagaggtcaaa
gtggcacagctggccggctccgtcgccgagatgtctgcctaccatcacggcgagcaagcg
ctcatgatgaccatcgtgaacttggcccagaacttcgtgggcagcaacaacatcaacatc
ctgcagccgctgggccagtttggcacacgcatcaacgggggcaaagacgccgccagccct
cgatacatcttcaccatgctcagccccctggccaagctgctgttcccggcggtggactcg
agtctcctgaagttcctgtacgacgacaaccagaaggtggaacccgagtggtacatcccc
atcatccccatggttctagtcaacggagccgagggcatcggaaccggctgggcctgcaag
atcgccaactacgacccgcgagagatcgtcaacaacatctaccgccttctcaacgggcag
gaccccatgcccatgctgccgaagtataagaactttaaaggggtgatccatgagttgggt
cagaaccagtacctggtgagcggcgaggtgtctgttctggacaagaacaccatcgagatc
acagaactgcccgtcagaacctggacacaggcctataaggagtcagtgctagagcccatg
ctgcagggcacagagaagactccagcgctgatcacagactataaggagtaccacaccgac
accaccgtcaagttcgtggtgcgtatgtcggaggagaagctcgcccaagcagaggccgcg
gggctgcacaaggtcttcaagctgcagtcctccctcacctgcaactccatggtgctgttt
gaccacatgggctgcctgaagcggtacgattctgtgcaggacatcctgaaggagttctac
gagctccgcctccactactacaagctgcgcaaggattggctgatgggcagcctgggggcg
gaggctgccaaactgtccaatcaggcgcggttcgtcctggagaagatcgaagggaagatc
tctattgagaacaagtcgaagagggagctgattcgcatgctggtgcagaggggctacgag
tccgaccctgtggccgcctggaaccgagcccaggagaaggtgctggaggaagatgacggt
ggcggtgacagtgacggctcgctggactccagctcgtcctcagggcccaacttcaactac
atcctcaacatgccgctctggtgcctgaccaaggagagggtggacgagctgctcaagcag
agagacgccaagaaagcggagctgaatgagctgcagaggaagtcgcgagaggacctgtgg
aaggaggacctggctgtcttcatccaagagctagaccgcgtggaggagcaagagaaggag
acggtgcagctggggaaggcggctaagatggtgaaggggaaagtggggaagcccaaggcg
cgcaagatggagctggaggagacgctgccgtcaccgtacggacgccgcgtggagccgccc
ctctccctctccgtcaaggccgacgccgccaagaaggccagcaggaagaaaaagggtgag
ctggacgtgaagctggagggtgatgaggatggtgaggccacaggagagaactctctcatc
tccccgtcaggtctcggagccgcccccgccaaacccaaaacgccccgcgtcaagaaggag
aagaaagaacccagtacccctcgggagaaaaagactccgactcccaaagggtcctcatcc
aagaaggtgaagaaacggaacccctggtctgatgacgactcaaagtccgacagcgacctg
gacgagagcgagccagtcattccccgggaaacccagtccaagagagcctcagccgtgaaa
gccaagtacacgttcgacttctcggaggaagaggatcgcggcgatgatggagacgacgat
caggacgaggacggccgctcgtcaccggtgcgttcctatggcgacagcttcagcacatcc
cagagcaaggagccgtacaacaataacaccaacgaggaagacgacgatgatgaagacgac
atcttccctccaaaacagtccttcacaccgtctgctccagcaactaaaaagaaggaacct
gcaaaatcatccaaatctgccttctctgacacagtcagactgagcagtgatagtgacggc
gggaagtcggacagcgacgatggcaacggcccctcggtcttctcgtctttctccagcagc
tcagtcttcgacaaatcaacgcctgccaaaaaagctaagaagccgacggaatcggtgcct
aaacccaagaagactccggccaaaactaaacccaaacccgacacatcgctctgggagtca
gactcagacacaggggccaagaaatcaacaccagcactcaaaggtaaaggtcgggggaag
aaacggaagcagtcggactccgagggtgacgactacagccccatgaagaaggcggggaag
acccctacgcctagtaggcagaagaagaagccctcttcagacgatgaggacgagtctttc
agccggtcagatccgtcacgcgatcgacctggtcgctccagaaaggaagtgaggtacttc
gccgagtccgacgacggtgaagatgacatgtttgactaa
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integrated database retrieval system
