Alosa sapidissima (American shad): 121695194
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Entry
121695194 CDS
T11137
Symbol
tent4a
Name
(RefSeq) terminal nucleotidyltransferase 4A isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121695194 (tent4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121695194 (tent4a)
03016 Transfer RNA biogenesis [BR:
asad03016
]
121695194 (tent4a)
Enzymes [BR:
asad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
121695194 (tent4a)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
121695194 (tent4a)
Transfer RNA biogenesis [BR:
asad03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
121695194 (tent4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
DUF7752
Motif
Other DBs
NCBI-GeneID:
121695194
NCBI-ProteinID:
XP_041931713
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All DBs
Position
21:complement(16268845..16304120)
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AA seq
818 aa
AA seq
DB search
MDPRVAWIQPEQKGPANALWMHVWETSQVVRANSGQHHNHHNICVNSPVLDGFKNVAAAA
TSSKGVCSSNPATTVSSHQSNANNSTNVNSRNGTAIAGFATLPNGSAQNGMIASSLNANG
VKVGVEEAKTSVQTGSVSSSSSVESGADSPSSNCSSMGRTTNFSNVNVSGSVLTGNMNRN
TGGPNLFFSFSENMFNNVNHHHHHHHHHQRHSHQEQQQYNIQQNCIKRHPFNPSAIHNHH
NHHHPGRRKSDNKASTYGINYQLSNLSNGNYVSSGTPWKTRRYSLGVDGLHEEIVDFYNF
MSPRPEEAAMRKEVVDRIETVIKDLWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPP
LQQLEQALRKHNVAEPYSIKVLDKATVPIIKLTDQETEVKVDISFNVETGVKAARFIKDY
VKRYTVLPYLIFVLKQFLLQRDLNEVFTGGISSYSLILMVISFLQLHPRIDTRNPSVNFG
MLLIEFFELYGRHFNYMKTGIRIKNGGAYMAKEDIMKAMTNGYRPSMLCIEDPLLPGNDV
GRSSYGAMQVKQVFDYAYIVLGHAVSPLARSYPNKDIDSTLGRIIKVTQEVIDYREWIFQ
KWGGRAERNTGVVHKDPTEMVDSSPLLGVSVEDQQQRDSVSPHSADSPMSLSSPQQHSSA
SSTSSLSGGSDIDSDPTPCVPPPLPQYPLPLALGALPPALQISTAKPNLSTALGMPPVSQ
GRVSMQGGLPLHALPGRQVCMADGPPPPYLHMPPPASPSPLPSPHLHHKQNGPKFPKGFH
NSAVAHSPVLANRNGHVQYNRNTWRRRKRESLPASVSR
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagggttgcttggattcagccggaacagaaaggacctgcgaacgccttatgg
atgcatgtctgggaaacgtctcaggtagtccgggctaactccggtcagcatcacaaccac
cacaatatttgtgtcaattctccggtgttggacggttttaaaaatgttgcggccgcggca
acatcaagcaaaggcgtctgcagcagcaacccagccaccaccgtaagcagtcaccagagc
aatgcaaataacagcactaacgttaactcacgaaatggcactgcaatagctggatttgca
acgttaccgaacggcagcgctcaaaacggtatgattgcttcatcgttaaacgccaatgga
gtaaaggtaggtgttgaggaggccaaaacgtctgtacagacgggctcagtttcttcgtcg
tcctcagtggaatctggagcggacagtccatcttccaattgctctagtatgggaaggact
actaactttagcaatgtgaacgttagcggcagtgttctcacagggaatatgaacaggaat
actgggggtcccaatctgttttttagtttcagtgagaatatgtttaacaatgtcaaccac
catcaccaccaccaccaccaccatcaacgccattcgcatcaggagcaacagcagtataat
attcaacaaaattgcatcaagcgccacccgtttaacccgtctgcaatccataatcaccac
aatcaccaccatccaggccgaaggaaaagtgacaacaaagcgagcacgtatggaataaac
taccagctgtctaatttgagtaatggcaattatgtcagttctgggacgccgtggaagacg
agaagatacagccttggggtggacgggcttcatgaggagattgtggacttctacaacttc
atgtcccctcgaccagaagaggcggccatgaggaaggaggtggtggaccggatagaaacg
gttatcaaggacctttggcccaccgcagatgtgcaaatatttggtagctttagcactggc
ctctatctccctaccagtgacatcgacttggtggtctttggcaaatgggagaggcccccg
cttcaacagttggagcaggcactccggaaacacaacgtggcagaaccgtactccatcaaa
gtactagacaaagctacggtacccatcatcaaactgactgaccaggagacggaggtgaag
gtcgacatcagctttaacgtggaaactggcgtcaaagccgcacgctttatcaaggattat
gtgaagaggtacaccgtgctgccttacttgatcttcgtgctgaagcaatttctcttgcaa
agagatttgaacgaggtcttcactggaggcataagctcctacagcctcatcctcatggtc
atcagcttcctgcagctgcatccacgcatcgacaccaggaatcccagcgtgaacttcggc
atgctgctgatcgagttctttgagctgtacggccggcacttcaactacatgaagacgggc
atccggataaagaacggtggcgcctacatggccaaagaggacatcatgaaggccatgacc
aacggctaccggccctccatgctctgcatcgaggatcccctgctgccagggaatgatgtt
gggagaagctcgtatggggcaatgcaggtgaaacaggtgtttgactatgcctacatcgtc
ctgggccatgcggtatcgccactggcgcgttcctacccgaacaaggacattgacagcact
ttgggacgcatcatcaaggtgacccaggaggtcatcgactaccgggagtggatcttccag
aagtggggcggccgtgcagaacggaacacaggtgtggtgcataaggacccgactgagatg
gtggactccagccctctgctgggcgtgtctgtggaggaccagcagcagagggactctgtc
tcgccccacagcgcagactcccccatgtccctgtccagcccccagcagcactcatcggcc
tcctccacctcctcactgtccggcggcagcgacatagactcggacccgaccccctgcgtg
ccaccaccgttgccccagtacccgctgcccctggcactgggtgcccttccccctgcgctc
cagattagcacggccaaacccaacctcagcacggcactgggcatgcctcctgtctcccag
ggccgagtgtccatgcagggtgggctcccgctccacgccttgcctggcagacaggtgtgt
atggcagacggacccccacccccatacctccacatgccccccccagcctcccccagccca
ctgcctagtccccacctccaccataagcagaatgggcctaagttccctaagggcttccac
aactcggccgtggcccacagccctgtgctggccaaccgcaatgggcacgtgcagtacaac
cgcaacacctggcgccgccgcaagagggagagtctgcccgccagcgtcagtagatag
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