Alosa sapidissima (American shad): 121695227
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Entry
121695227 CDS
T11137
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121695227 (vps50)
Membrane trafficking [BR:
asad04131
]
Protein recycling
Others
EARP complex
121695227 (vps50)
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GFIT
Other DBs
NCBI-GeneID:
121695227
NCBI-ProteinID:
XP_041931800
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Position
21:complement(14524156..14660899)
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AA seq
988 aa
AA seq
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MQKIKSLMARQGLKSPQESMADMSPVENFRIPSKEELREMREQPIDPQAEQEIIDSIEEV
YFSSDSFDMVQHELEKLPPDLNLQEIEEYRDKLKRQQSAVSKKVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLSFSKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITTDSYIPCLTDLCKALWEVMLSYHRTMQWHEEQDKEEAASPDPE
GSSEDGSDEAVVGRTYVKKKLEHGLSRIWQDVQLKVKAYLLGTDMSNFKYDDFIVVLDVI
SRLMQVGEEFCGSRSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFS
IAQLHEFKFMGQCRSPSVSPSRQASSITSPTEVSLFLQGGNPFEMQIDSKEEETEDVLAS
NGYESDELEKNVYQDYDSDSDVAEELKQDYVDEQTGDVPVKSVSRETLRSRKRSDYNLNK
TNAPILTNTTLNVIRLVGKYMQMMSILQPIAFDVIHCVSQLFDYYLYAVYTFFGRNDMPV
TSQSAAPQGKEQGAARQAPPVYWYESSGLGLISSRLRTTLNRIQESLIDMEPSGESMGPH
GPPEERREKVPSPHLSQMVVLTSSGTLYGLAQRVVATESLVFLAEQFDFLQSHLDAMMPS
AKKPFLQQFYSQTVSTASELRKPIYWIVAARAIDYEQMLLLMAGVKWDIKEIMSQHNVYV
DVLLKEFEQFNKRLSEVSRQVRIPLSVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRAL
MQLDFQQFLTKLERLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLV
NVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaattaagtctttaatggcccgacagggtctaaaaagtccccaggaaagcatg
gcagatatgagtcccgtggagaatttcaggatcccaagtaaggaggagctccgtgagatg
cgggagcagcccatcgacccgcaggccgagcaggagatcatcgacagcatcgaggaggtg
tacttctccagtgactccttcgacatggtgcagcacgagctggagaaactcccacctgac
ctcaacctccaggagattgaagaatacagagacaagctgaagcggcagcagtcggcagtc
tccaaaaaagttgctgatctcatcttggagaagcagccctcctatgttaaggagctggag
agagtgacgtcactgcagaccaacctgcagctggccgcagtcatctgcaccaatgccagg
aggcagctgagcttttctaaagagggcttcactgaggccagtctcggactcctagccaac
cagaggaggaggcaactgctgaccggcttactcaagtctctgaggaccataaagaccctg
caaaggacggacgtgaggcttagtgagatgctggaggaggaagattatccaggtgctatc
cagttgtgtctggaatgtcaaaaggcggccagcacgttcaaacactacagctgtatcagt
gagttgaattcaaagcttcaggacacgctggagcagatagaggagcagctggatgtggcc
ctgtccaagacctgcaagcactttgacgtctcgcactacaccaaagtccagctggcctac
actctcctgggcaaaacgcagacggcgatggaccagctccacatgcacttcacccaggcc
atccacaacactgtgttccaggtggtgctgggctacgtggagctgtgtgctggcaacgct
gacaccaagttccagaagatgcagtacaaagacctctgcacgcacatcaccacagacagc
tacatcccctgcctgactgacctctgcaaggcattgtgggaagtgatgctgagctaccac
aggacaatgcagtggcatgaggaacaagacaaggaggaggcagccagccctgacccagag
ggcagcagcgaggacggatccgacgaggcagtggtgggccgcacctacgtgaagaagaag
ctggagcacggcctcagccgcatctggcaggacgtccagctgaaagtgaaagcttacttg
ctggggacggacatgtccaacttcaagtacgacgacttcatcgtggtcctggatgtcatc
agcaggttgatgcaggtgggggaggagttctgtggtagccgctccgaggtcctccaggag
tccatcaagcgccagagcgttaactacttcaaaaactaccacaggactcgcctggaggag
ctgcggatgttcctggagaatgagacatgggagctgtgccctgtgaaatccaacttcagc
atcgcccagctccacgagttcaagttcatgggccagtgtcggtccccgtcagtgtcgccc
agtcgccaggcttcgtccattacaagccccacggaggtgtcgctgttcctccagggaggc
aaccccttcgagatgcagatcgacagcaaagaggaggagaccgaagacgtgctggcctcc
aacgggtacgagtctgacgaactggaaaagaatgtgtaccaggactacgacagtgacagc
gatgttgcagaggagctcaagcaggactacgtggacgagcaaacgggcgacgtgcccgtc
aaaagtgtttccagggagaccttgcgcagccggaagcgttcagactacaacctcaacaag
acaaacgcacccatcctgaccaacaccaccctcaacgtcatacggctggtcggaaagtat
atgcagatgatgagcattctgcagcccatagcctttgacgtgatccactgcgtctcacag
ctctttgactactacctgtacgctgtctacacattctttggacggaacgacatgcctgtc
actagccagtctgcggcgccgcaaggcaaagagcagggcgcagccaggcaggcccccccg
gtttactggtatgaatcatcaggcctgggactgatcagcagccgcctgaggaccacgctg
aaccgcatccaggagagcctcattgacatggagcccagcggggagagcatgggtccccat
ggtccccctgaggaacgccgggagaaggttcccagcccccacctgagccagatggtggtg
ctgacctccagtggaacgctctacggcctcgcccagagagtggtggccaccgagtcccta
gtgtttctggcggaacagtttgacttcctgcagtcgcaccttgacgccatgatgccttca
gccaagaagcccttcttgcagcagttctactcgcagactgtgtccacggccagcgagctg
cggaagcccatctactggattgttgcggccagagccatcgactacgagcagatgctgctc
ctcatggctggggtcaagtgggacatcaaggagatcatgtcccagcacaatgtgtatgtg
gatgtccttttgaaggaattcgagcagttcaacaagcggctgagcgaggtgtctcggcag
gtgcggatccctctgtccgtctccaacgtcctgtgggagcactgcatccgcctggccaac
cggacactggtggagggctatgctaatgtgaagaagtgtagcaacgagggacgtgccctc
atgcagctggacttccagcagttcctcaccaagttggagcgcctcaccgacctgcggccc
atccccgacaaggagtttgtggagacctacatcaaggcctactacctgaccgagaacgac
atggagcagttcatcaaaaaccaccgggagtactcaatgaagcagctggccaacctggtg
aatgtgtgtctgggctctcacatcaacaagaaggcccgacagaagctcctggcagccatt
gatgacattgacaggcccaagagatag
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