Alosa sapidissima (American shad): 121695233
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Entry
121695233 CDS
T11137
Name
(RefSeq) perforin-1-like
KO
K07818
perforin 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121695233
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Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
121695233
NCBI-ProteinID:
XP_041931815
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Position
21:complement(14912820..14927859)
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AA seq
593 aa
AA seq
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MFLTTTTILAGVILFLPYPSLQSCISGTIEHCQRAEIAPGSSLVGEGFDITTMQRKGAFV
IDMDTFETPNKTCTLCANPYRGGKIEKIPTSVINWRPLHKCSIAIKSELLESALAVADHV
SKSVENNWKIGLGLSKGGYGGSLALSGTNSKLTTTAMEKSKQDRFNFLSHSVYCGFYSYM
MSSNPNLNQDFKQAVEKLPQIYSPSNKVAYDAFIDTYGTHFIRKVKTGGKIVSMTSIREC
KASMMGLSSDEVKMCLGAEVAVKIPYKVDIDLSAEIKFCNGKKEKVHGRRSFSSVFNDRI
TEITGGQTEGELLFSAGRDASAYKKWLASLPVSPGVISYTLKPLHQLIPDRKVKRELKQA
IKDYILSRGAKRECSDHCSLGRRTKPRSCECHCQSHKGLGTNCCPTRPGLAIVAFTIIRG
QGLYGDTASGTDGYVKIFDENKIPLGKTPMILNNDNPYWNWELNIGDMLLSANSKLRIEV
WDEDDKYDDLLGTCLAKLQSGGDQGERVCALNHGVLFYKLKVTCGPSLSGPSCAEYVSSP
MDSLLEKLYVSRHARPIPKRMLFQMGLRLDGQAFNYMLTDNSSVLNGDKADWL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgacgaccaccaccatattggcaggggtcattctgttcctgccctatccctcc
ctccagtcatgcatctctggcacaatagagcactgccaaagggcagaaattgccccggga
tcatccttagttggtgaaggttttgatattaccacaatgcaacgtaagggagcttttgtt
atagatatggacacatttgaaactccaaacaaaacctgcaccctctgtgcaaacccctac
cgtggagggaaaattgagaaaattcctacatctgtcattaactggaggcctcttcataaa
tgtagcatagctatcaagagcgaactactggaatctgccttggcagtggctgatcatgtt
agcaagagtgtggagaacaactggaagattggtctaggtttgagtaagggagggtatgga
ggttcactagctctttctgggacaaattcaaaactgaccacaactgccatggaaaagagc
aaacaagaccgtttcaactttttgagtcactcagtatattgtggattttacagctacatg
atgtcaagcaatccaaatttgaatcaagatttcaaacaagccgtggaaaagctcccgcag
atctacagcccaagtaacaaagtggcttatgatgctttcattgacacatatggcactcac
ttcataagaaaggtaaagactggtggcaaaatagtatcaatgactagtatcagggagtgc
aaggcctccatgatggggttgagctccgatgaggtgaagatgtgcctcggtgctgaagtt
gctgtaaaaatcccatacaaggttgacatcgaccttagtgcagaaattaagttctgtaat
gggaagaaagagaaagtgcacgggagaagaagcttctcaagtgtctttaatgacaggatc
acagaaatcaccggtgggcaaacagaaggtgagctccttttctctgcaggtcgagatgcc
tctgcttataaaaagtggcttgcatccctgccagtcagcccaggtgtgatctcctacacg
ttgaagccccttcaccagctgattccagatagaaaggtgaagagagagctgaagcaagcc
atcaaagactacatcctcagcaggggtgccaagagggaatgctctgaccactgcagcctt
gggaggagaaccaagccaaggtcctgtgaatgccactgtcaaagtcacaaggggttagga
accaactgctgtccaacacgtcctggcttagccatagttgctttcaccatcataagggga
caaggtctgtatggtgacactgcttctggtactgatgggtatgtgaagatctttgatgag
aataaaataccgcttggcaagacacccatgattctgaacaatgacaatccttactggaac
tgggaacttaacattggtgacatgctgctgtctgcgaacagcaaactcaggattgaagtg
tgggatgaagacgacaagtatgatgacctccttggaacgtgcttggcaaaacttcagtcg
gggggtgaccaaggggagagggtctgcgctcttaatcacggggtgttgttctacaagctg
aaggtgacctgtggtccgagtctgagtggcccatcctgtgctgaatatgtgagctctccc
atggacagtctgttggagaagctgtatgtctctcgtcatgctcgtcccattccaaagcgc
atgcttttccaaatgggactgcggttggatgggcaggcattcaactacatgcttacggat
aacagctcagttctaaatggagataaggctgactggctctaa
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