Alosa sapidissima (American shad): 121695308
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Entry
121695308 CDS
T11137
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121695308 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
asad01007
]
121695308 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asad03016
]
121695308 (vars2)
Enzymes [BR:
asad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
121695308 (vars2)
Amino acid related enzymes [BR:
asad01007
]
Aminoacyl-tRNA synthetase
Class I (U)
121695308 (vars2)
Transfer RNA biogenesis [BR:
asad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121695308 (vars2)
Prokaryotic type
121695308 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
121695308
NCBI-ProteinID:
XP_041931956
LinkDB
All DBs
Position
21:11601484..11615277
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AA seq
1090 aa
AA seq
DB search
MWNPMCSLPLGIRQSGTNRVWRVWGCRLCSQSPKTPIQQSNPTLRPQAEKQRRKREREKA
ILTKGVGNEGIKWTEKDRIIYSASTVPGEKKDTTVPFPKAYSPEYVESCWYQWWEKEGFF
TPEHHRKLSHSVNGTFSLCIPPPNVTGSLHLGHALTVAIEDTLSRWRRMQGYKVLWVPGC
DHAGIATQSVVERKLLRKHGKRRQDYSREEFLREVWNWKNDKGDEIYEQLRKLGASLDWT
RACFTMDPGFSSAVTEAFVRLSDSGLIYRSEGLVNWSCALESAISDIEVDSKQLPGRTLL
SVPGYERNIEFGTIVTFAYPVEGQDGEVCVSTTRPETMLGDVAIAVHPDDPRYTALHGRH
CRHPFTDRLLPIIPDASVDMQFGTGAVKITPAHDHADFLLSQRHELPRLTVIGGDGLMTA
LCGHWLEGVKRFDARMRVLEALTEKKLFRGIKDHPMALPICSRSGDVIEPLLKRQWFVRC
EEMAKKAIQAVDEGQLDIQPHFYTKIWKNWLSNISDWCISRQLWWGHQIPAYRVSMPHAT
TQEEELWVWGRSEAEARERAAAKFGVAQDGICLTRDADVLDTWFSSALFPFAMLGWPQQT
SDLEQFYPNSMLETGSDLLFFWVARMVMLGTELTGQLPFKQVLLHSLVRDKYGRKMSKSL
GNVVDPLDVIHGVSLERLQEKVKEGNLDPRESAVAMEAQRKDFPQGIPECGTDALRFTLC
SYRTQGEDISMSVSQVLSCRHFCNKMWQTVRFTLGVLQDSNEPVKPLDQISPISSMDRWI
CSRLLSTLRQCEEGFHGYELHAVTAALHSFWLHSLCDVYLECIKPVLSSPVTATEGDESR
VHAGNVTEVERCAARSLLYHCICVSLTLLNPIMPFITEELWQRLHPYSPLADHHATSLCV
QPYPQSSQLVNWDFPQEEADFKLAQEVIRVARSLRAQCHMTKERPRLWVVCTPVQAQTLQ
SFSAAVETLGRVSGLHFHCPPEEGATALPISTPPPPEGCAVGVVNHTCQLHLDVQHHVAV
DRQVASLLERRSRVQPKLEQLLGRIVTPGFMEKVPERVRLDTEQRILALKQELKNIEEQL
QALEQMKKSQ
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatcccatgtgtagcctgccactggggatccggcaaagtgggacaaaccgagtg
tggagagtgtggggttgcagactctgttctcagagtcctaaaacccccatccaacagtcc
aatcccacattgcggcctcaggctgagaaacagagacggaaacgagagagagagaaagcc
atcctaaccaagggtgttggaaatgaaggcataaaatggactgaaaaggataggataata
tacagcgcttccactgtaccaggagaaaagaaagacaccactgtgccctttcctaaggcc
tatagtccagagtatgtagagtcctgttggtatcagtggtgggaaaaagaagggttcttt
accccagagcaccataggaaactgtcacattctgtcaatggaactttctcactgtgtatc
cctccccccaacgtgactggatctctccatctgggccatgccctgactgtggcaattgag
gacaccctctcccgctggcgacggatgcagggctacaaagtgctgtgggtaccaggctgt
gatcatgccggaattgctacacagtctgtagtagagaggaagttgctgaggaaacatggg
aagcgtcggcaagactacagccgagaggagttcctccgggaggtgtggaactggaaaaat
gataaaggagatgagatctatgagcagctgaggaaacttggagcctccctggactggacc
agagcctgcttcaccatggacccaggtttcagcagtgctgtgacagaggcctttgtgcgt
ctgagtgactctggtctcatctaccgctctgaaggcctggtcaactggagctgtgctctg
gaatcggccatatctgatatagaggtagactccaagcagttgcctggtaggacacttctg
tcagttcctggttatgagcgcaacattgagtttggcacaatagttacatttgcatatcct
gttgaaggacaagatggcgaggtgtgtgtatcaacaacgcggccagagaccatgctggga
gacgtggccatagctgtgcacccggatgatcctcgatacacagcactccatggcaggcat
tgcagacacccctttactgaccgcctgctgcccatcatccctgatgcgtcagtggacatg
cagtttggcacaggagcggtaaagatcaccccagctcatgaccatgctgacttcctgctc
tcccagcggcatgagctcccacggctgactgtgattggtggagatgggcttatgacagct
ctctgtggacactggcttgagggtgtcaagcgatttgatgcacggatgcgggtgctggag
gctttgaccgagaagaagctgttcagagggataaaggatcatcccatggctctacccatc
tgcagtcgctctggagatgtgattgaaccactcttaaagagacagtggttcgtcagatgt
gaagaaatggcgaagaaagctatacaggcagtggatgagggacagcttgacattcaacct
cacttttatacaaagatctggaagaactggctttccaacatcagtgactggtgcatctcc
agacagctttggtggggacatcagattccagcctatcgagtgtctatgccacacgccact
acccaagaggaggagttgtgggtgtggggaaggagtgaagctgaggctcgtgagcgtgct
gcggccaagtttggagtggcacaggatggaatctgcctcacacgggatgctgatgttctg
gacacctggttctcctctgctctcttccccttcgccatgctgggctggcctcagcagacc
tcagacttggagcagttttaccccaactctatgctggagacaggaagtgacctcctcttc
ttctgggtggcaaggatggtgatgctgggcacagaactgactggccagctgccttttaaa
caagtgttactgcactcgctggtgagagacaagtatggcaggaagatgagcaaatccttg
ggtaatgttgtcgacccgcttgatgtcatacatggagtttcactggagcggctgcaggag
aaggtgaaggagggcaacctggaccccagagagagtgctgttgccatggaagcgcagagg
aaagacttcccgcaggggatacctgagtgtggcactgatgccctgcgtttcactctctgc
tcctacagaacccaaggtgaggacattagcatgtccgtgtcccaggtgctcagctgtagg
catttctgcaataagatgtggcaaacagtacgcttcactctgggagtcctgcaagacagc
aacgagccagtcaaacctctggaccagatatctcctatctctagtatggatcgttggatc
tgctcacgtctgctcagcacattgcggcagtgtgaagagggtttccatggttatgaactg
cacgctgtcaccgcagccctgcactcgttctggctgcacagcctctgtgatgtctatctg
gagtgcattaagccagtgttgagctcgccagtcacagccacagagggtgatgagagcaga
gtgcatgctgggaacgtgacagaggtggagaggtgtgcagcacgctcactcctctatcac
tgcatctgcgtctctcttaccctcctcaatcccatcatgcctttcatcacagaggagctc
tggcagaggcttcacccatacagtcccctggccgaccaccatgccaccagtctgtgtgtg
cagccctacccacagtcttctcagctggtcaactgggacttccctcaagaggaagcagac
ttcaaattagcacaggaagtcatccgtgtggcaaggtcactgagagcccagtgtcacatg
actaaagagaggcctcggttatgggtggtatgtactccggttcaagctcagaccttgcag
tcgttctctgctgctgttgagacactgggccgcgtctctggcctgcactttcattgccca
cctgaggagggcgccactgccctgcccatatctactccaccccctcctgaaggctgtgct
gtgggtgtggttaaccacacctgccaattgcatttggatgtacagcatcatgttgcagtt
gacagacaggtggcatctctgttggaacgtagaagccgtgtacagcccaagctggagcag
ttgcttggtcgcatcgtaactccaggctttatggagaaagttcctgaacgtgtgaggctg
gacacagagcagaggatcttagccttgaagcaggagctaaagaatattgaggagcaactt
caagcattggaacagatgaagaaaagccagtaa
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