Alosa sapidissima (American shad): 121695357
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Entry
121695357 CDS
T11137
Symbol
cthrc1a
Name
(RefSeq) collagen triple helix repeat-containing protein 1a
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asad03037
]
121695357 (cthrc1a)
Cilium and associated proteins [BR:
asad03037
]
Other cilia and associated proteins
Stereociliary proteins
121695357 (cthrc1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
121695357
NCBI-ProteinID:
XP_041932045
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Position
21:18472399..18479752
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AA seq
225 aa
AA seq
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MGSMQVVFWALFVFHVCGSQKVKRQKETEFVDKYGTCLQGPPGNQGRDGNPGVNGIPGTP
GIPGRDGLKGEKGECVSERFEDPWRPNFKQCAWNSLNYGIDLGKIADCTFTKLRSDSALR
VLFSGSLRLKCRSACCQRWYFTFNGAECAGPLPIESIIYLDQGSPELNSTINIHRTSAVE
GLCEGIPAGLVDVGIWVGTCADYPKGDASTGWNSVSRVIIEELPK
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatgcaagtggtgttctgggctttgttcgtttttcatgtctgcggatcacag
aaagttaaacgacaaaaggagacagagttcgtggacaagtatggcacgtgtctccagggc
cctcctggtaaccaggggagggatggtaacccaggggtgaatggcatccctggcacccca
ggtatccctggacgcgatggcttgaaaggagagaagggcgagtgtgtgagcgagaggttt
gaggatccgtggaggccaaacttcaagcagtgtgcctggaactcgctgaactatggcatt
gacctgggaaaaattgctgattgcacgttcaccaagctacgttcggacagtgccctgcgc
gtgctgttcagcggctcgctgcggctcaagtgcaggtcggcttgctgccagcgctggtac
ttcaccttcaatggagccgagtgcgctggaccgctgcccattgagtccattatctacctg
gaccagggcagcccggagctcaactccaccatcaacatacaccggacgtcagcagtggaa
gggctttgtgaggggatccctgccggcttggtggatgtgggaatttgggtgggcacatgt
gcagattatccgaaaggagacgcatcgactgggtggaactccgtctctagggtgatcatc
gaggagcttcccaaatga
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