Alosa sapidissima (American shad): 121695368
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Entry
121695368 CDS
T11137
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121695368 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121695368 (nup98)
03036 Chromosome and associated proteins [BR:
asad03036
]
121695368 (nup98)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121695368 (nup98)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121695368 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121695368
NCBI-ProteinID:
XP_041932065
LinkDB
All DBs
Position
21:complement(30654970..30766185)
Genome browser
AA seq
1793 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTTSTFGQQTTSFGATGGFGSSAFGTTNTTGGLFGAAQNKPGG
LFGSSTFSQPVTSATSSGFGFGTASGTSNSLFGSTNTGGGGLFSQQSNAFGTNKPASFGT
FGTSTSSGGLFGATNTNSNPFGGTSGSLFGASSFTPAQPGTTLKFNPPTGSDTMVKGGVT
TSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNPMTAGTGGLFGTAAAATPSTAA
GLFGSSANNTGFSFGQNKTTFGTSTGGFGTASGSLFGQQPPPQQTASLFKPFGQATTTQT
TGFSFGNTNTLGQPNTSSMGLFGNTAVSQAGGLFGNTANTSTATGFGASSGLFGQTNTGF
GSVGAQNLFGNKPGGFGTTTTSASSFGPGLFGNKPTLTLGNNTNTANFGFGANPTGGSLF
GNKTAASGLGTGLGAGFGAAVGTGQTSLFGNNQNKLGSTLGTVNAFGASAFNTGTNSLGL
GAPQQPISLTDPSAAATQQAVLQQQINALAYSPFGDSPLFRNPLSDPKKKEERLKPTNPA
AQKALVTTTHYKLTPRPATRVRPKALTPSGTLKSVLFDGLDDDEPSLTNGTFVPRKNIKK
LVLKNLTSSSLSAVDRDVDDLASPPEYPLSCIEESEEVNQSDMVGEDSPTLPESHDQQST
VCDFNLSKTGGEEENRNDNTYLDPINEETFMKDDSIPEELQEEQDAQKSPHPAGVVLHRV
GYYTIPSMDELSRMLNENGECVVDNFTIGRKGYGSVFFPGAVNLTNLNLDEIVHFRRKEI
IIYPDDMTKPPEGEGLNRRAEVTLDGVWPNDKTTCSQIKSPDRLVDMNYEGRLETASRKQ
GARFLEYRPETGSWVFEVAHFSKYGLQDSDEEEESHLTKTDLKKVKTGLAPPAAVLQPAP
PNPQQLGSQLSQNLVLPELLGHVSEMDSDMADITQEPTVDVLEEEDFGSPVALEHQLADP
DTLVHQPLMSTSSHIPSSMGINPHTLQIMKASLFVGDDDGDPFQQDASEPQMSSSLQTLN
VIQERRYGLGNTKGLLTYRQEAQCNASPAKQIKQFFMSSDPYMALSSHCLSHTQPVLEAT
MRTVGVRHLGGPVPIANSVTQGKCRLLMDAALFAGRSFRVGWGPGWKLAHSGEALSTNGA
SDITKEQLCVDGIGFSAKPTTSKTGPFQVHLEQLGSLESTESELDQFLYRQPLEISQKYG
TISTEENCPFIQPQPGVHALHDYAQWITKVNEDGSRNAVLSHWQQVWTLCKALWGGLTEA
SEEENVEQNCCGSYKQQLERRQNFSAWLACAAETRICQELGVATQHSPTEAIFSYLTGHK
ISEACKLAQQSGDHRLSLLLSQAAGLPYSQDLLALQLGDWNRMQIGSCLQEERLRIYALL
AGKPVWQSGNSCINVCAELDWQRCIAVLLWYMLPPTASISDALTKYETAFQGSPDELKYA
CAPLPPYLESCDLACIEEEMEEEGVKKPLYDICFHLLKLYSDRHHNLQQLLDPSTVTIQQ
LDYRLCWHLWNVLQALNYTHLSPECQARLHSSYAAQLESAGHWELSIFVLLHIPNSMQRE
RAVREMLCSYCSLLETEDSAEKESFLTKGLKIPVHWIHEAKAIRARHDSDKHQEALHLYH
ARSWSQCHRLVIHHLAADCIINDNHDYLLHILEGLAVPERHAQIQDWDVSGRVFLDYIHV
IQTLQSIQQMDGPGYELERLYTEVTSLCSRIELLPCISAKDRLAQSEMAKRLANILRAVL
TLQQEGDATSDLPLIPLCCLAPHIGRLPMPEDYALEELRSLTQSYLRELIFSQ
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaagtcatttggtgctccctttggaggtggaactgggggatttggtacaaca
tccacttttggccaacaaaccacaagttttggagcaacaggtggttttggatcgtcagcc
tttggcaccacaaacactacaggtggtctctttggagctgcacagaataaaccaggtggg
ctctttggatctagcactttcagtcagccagtaacttcagccaccagtagtggttttggc
tttggcactgcaagtggaacatctaacagtctatttggaagcaccaacactggaggaggt
ggtctcttttcacagcaaagcaatgcctttggtaccaacaaaccagcttcctttggcacc
tttgggaccagtaccagcagtggtggactatttggtgcaaccaataccaactcgaaccca
ttcggaggcacctctgggtcactttttggggcatcaagtttcactcctgcccaaccaggg
acaacacttaaatttaatcccccaacaggaagtgacaccatggtcaaaggtggagtgaca
accagtatcaacacaaaacaccaatgcatcacagccatgaaggagtatgagaacaaatct
ttggaagaactcagactggaagattaccaggcgggtaggaagggtccctccaaccctatg
acagctggtactggaggtctgtttgggactgccgctgctgctacacccagcacagctgct
gggctgtttggctcctcggcaaacaatacaggcttctccttcggacagaataagaccaca
tttggaactagtacaggtggttttggtacagcatcaggcagtctttttggtcagcagcca
cctccccaacaaactgccagtctcttcaagccctttggccaagctacaacaacacaaact
acggggttttcttttggcaataccaatactttgggacagcccaacaccagcagtatgggc
ttgtttggtaacacagctgtgtctcaggctggaggcctgtttgggaacactgcaaacacc
agcacagctacagggtttggtgcaagttcagggctctttggccagaccaacactggcttt
ggtagcgttggcgcacagaatttgttcggtaacaaacctggtggttttgggacaaccact
acaagtgcctcgtcctttggacctggactgtttggaaacaagcctacacttacattgggc
aataacacaaacactgctaattttggttttggtgccaacccaactggaggaagcctcttt
ggtaacaagactgcagcgagtgggctaggcacaggccttggtgctggctttggtgcagct
gttggcactggacagacttctctctttggaaataaccagaacaagctgggttctacctta
ggtacagtgaatgctttcggagcctctgcatttaacactggcactaattctcttggcctt
ggtgccccacagcaacccatttccctcacagacccgagtgcagcagcaacacagcaggca
gttctacagcagcagataaatgcactggcatactctccctttggtgactccccacttttc
cggaatcccttgtccgaccccaagaagaaagaggagcgcctgaaacccaccaatcctgct
gcccaaaaggctcttgttacaacaacccactataagctgacccctagacctgcaacacgt
gtacggccaaaagcacttactccatcgggcaccttaaagtcagtgctctttgatggacta
gatgatgatgagccctccttgaccaatggaacctttgtgcctaggaagaacatcaagaag
ctggtgctgaagaatcttactagtagcagcctttcagctgtggacagggacgtagatgac
cttgcgtcacctccagagtatccactaagttgcatagaggagtctgaagaagtgaaccaa
tcagacatggttggtgaagattctcctacattgccagaatcccatgaccagcagagcacg
gtgtgtgattttaacttatctaaaactggaggtgaggaggaaaacagaaatgacaacacc
tacttggaccccatcaacgaggagactttcatgaaggatgactctattccagaggagcta
caggaagaacaggatgcacagaagtcccctcacccagccggggtagttctccaccgtgtg
ggctactacactatcccatctatggatgagctcagcaggatgcttaatgagaatggagag
tgtgtggtggataacttcaccattggccggaaaggctatggctcagtattcttccctggt
gcagtgaatttgaccaatctgaatctggatgaaattgtgcattttcgacggaaggaaata
attatatatcctgatgacatgaccaaacctccggagggggaaggccttaacagacgagct
gaagtgactctagatggagtatggccaaatgacaagactacttgtagccagataaaaagc
cctgatcgtttggtcgacatgaactatgagggaagactggagacagcatcccggaagcaa
ggtgcacgcttccttgagtaccgaccggagacaggttcttgggtatttgaggtcgctcac
ttttccaagtatggattacaggactcggacgaggaggaagaaagccatttgacaaagact
gatttaaagaaagtcaagactgggcttgcacctccagctgcagttttgcagccagcaccc
ccaaaccctcagcagctggggtctcaactgtctcagaatttggttttacctgagcttctg
ggccatgtgtcggagatggatagtgacatggcggacattactcaagagcccactgtagat
gttttggaagaggaagattttggaagtcctgtggcattagagcatcagctggcagaccct
gacactcttgtccatcaaccacttatgtcaacttcaagtcacatcccttcttccatgggt
atcaaccctcacacacttcagatcatgaaggcatctttgtttgttggggatgatgatgga
gaccctttccaacaggacgcatcagagcctcagatgtcctcatctcttcaaactctgaac
gtaatacaggaaagacgttacggactgggcaacaccaaaggccttttgacatatcgccaa
gaagcacagtgtaatgcctcacctgcaaagcaaatcaaacaattttttatgagctctgac
ccatacatggctttgtcaagccactgcctctcacatactcaaccagtgttagaggcaact
atgcgcacagtgggagtacgccatcttggtggccctgtacctattgcaaactcggtgact
cagggtaaatgccggctgctcatggatgctgccttgtttgccggccgctcattccgtgtt
ggttggggccctggatggaagctggcacacagtggtgaagcactctctaccaacggagcc
tcagacatcaccaaggaacaactctgtgttgacggtataggcttttcagctaaaccaacc
acaagcaagactggtcccttccaagtccacctcgagcagttgggaagtctagaatccacg
gagtcagagttggaccagtttttgtatcggcaacctctggagattagccagaagtacggt
accatcagcactgaggagaactgcccctttattcagccgcagcctggcgtgcatgcgctt
cacgattatgctcaatggattaccaaggtcaatgaagatggcagcaggaatgctgtgctg
agccattggcagcaggtatggactctctgcaaggcactgtggggtggacttactgaagcc
agtgaagaagagaacgttgaacaaaactgttgtggctcttacaaacagcagctagaacga
cgacagaatttctctgcatggcttgcttgtgcagctgaaacgcgtatttgccaggagctt
ggtgtggcaacccagcatagcccaacagaggccatcttcagctacctgacaggacacaag
attagtgaagcctgcaagctggcacaacaaagtggggaccaccgtctgtctttgctgttg
tctcaggcagcaggcttgccatatagccaagatcttctggcacttcagcttggtgactgg
aacaggatgcaaataggttcttgtctacaggaagagagactccgtatttatgccctcttg
gcaggcaaaccagtatggcaatctggtaacagctgtataaatgtttgtgcggagctggac
tggcagcgctgtatcgcggtgctgttatggtacatgcttcctcccactgcctctatttct
gacgcactgaccaaatatgagaccgcttttcagggttctcctgatgaactgaaatatgct
tgcgctccccttcctccctatttggagagttgtgatcttgcttgcatagaagaggaaatg
gaggaggaaggggtcaagaagcccttgtacgacatatgcttccacttgctgaaactctac
agtgaccgacaccataacctgcagcagctattggatcccagcacagtaacaatccagcaa
cttgactaccgactttgctggcatttgtggaatgtcctacaagcattaaactacacccat
ctttcacctgagtgccaggcccggctccactcaagctatgctgcccaactggagagtgct
ggccactgggagttgtccatctttgtgttgttgcatatacccaactcgatgcagcgtgag
cgagctgttcgtgagatgttgtgctcttactgctcactactggagactgaggattctgca
gaaaaggagtcttttctgacaaaggggctgaagatccctgttcactggattcatgaggct
aaggccatccgtgcacgccatgattcagacaagcatcaagaagcattgcacctctatcat
gccaggagctggagccaatgccaccgcttggtcattcatcacttagcagcagactgcatc
ataaatgacaaccacgactacctactgcatatcctagagggacttgctgtgccagagcgc
catgcacagatacaggactgggatgtttctggtagagtgtttctggactacatccatgtc
atccaaacactgcaatccatccagcagatggatggtccaggctatgagctggaaagactc
tacactgaggtgacatccctttgcagcagaattgagctgctcccatgcatttcagctaag
gatagacttgctcagtcagaaatggcaaaacgtttggccaacatcctccgtgcagtcctg
actttgcaacaagagggagatgctacatcagacctccctctcatcccattgtgctgcctt
gcgcctcacattggccggctgcctatgcctgaagattatgctctagaagagctccgcagc
ctcacccagtcttacctacgtgagctcattttcagtcagtga
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integrated database retrieval system
