Alosa sapidissima (American shad): 121695385
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Entry
121695385 CDS
T11137
Symbol
sall3b
Name
(RefSeq) sal-like protein 3b
KO
K19871
sal-like protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121695385 (sall3b)
03036 Chromosome and associated proteins [BR:
asad03036
]
121695385 (sall3b)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121695385 (sall3b)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121695385 (sall3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_15
zf-C2H2_2
zf-C2HC_2
zf-Di19
zf-H2C2_5
Peptidase_M4_C
zf-C2HE
UBZ_FAAP20
DUF2225
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
121695385
NCBI-ProteinID:
XP_041932098
LinkDB
All DBs
Position
21:complement(18927743..18934181)
Genome browser
AA seq
1220 aa
AA seq
DB search
MSRRKQAKPQHLMSEKTALTQVSSDEGILRGSDQENRENYGGHEGTHASESSPKELPSWP
HMCEHHMTGTEESPTLIMQEHMETPLSLEPPPQISNSITDTADNMDATEPKWTEQIQQNS
MDPVQSTKGKVDNRMDVVLEPEFQTYPEAQKCPYLSVPEVAGPLVQPPSTMVCYGAPSTN
VTLEILQSTRVAVAQFSQRVHSESLRGGESAAPLPIILDRLLDLQRQQIQQLQLIEQIRN
QVAMLNKQPMQTAQNLTSKGLSSTSGPHQLQAMLTQPMFPLLGLLPPNANGQVSGVETAA
SSLSLHPKTGQSDSAIRSMVSLPSSNHLSSVLSMASSALPPYSGSTTPVTGSQTNGSSVV
HSVEPNNVQTSHQSSSLPLLPLSPPGGIIFPNPLASIMATTNALDPLSALMKQRKGKLSN
VSIFDSKPSSDDSFFKHRCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNL
KVHFQRHKDKYPHVQMNPYPVPEYLDNIPTSSGLPYGMSLLPDKALSTWPDSRPLIASGH
VSAGLHLPSTFNGAERSTDSLSNASSAGSPLKASSAPSEYTSLSPNPTESRKPVDTVSTP
CSQVGEVSSIYLTGAAERFTSQNGLPTQNANMTTVSSESSSIQSTSPRSSLQSCNSDQPY
SKLQMDVDPMETSETSKLQQLVENIDKKVSDPNECVICHRVLSCHSALKMHYRIHTGERP
FKCKVCGRAFSTKGNLKTHFGVHRAKPPLWVQHSCPICQKKFTNAIVLQQHIRMHMVGHI
PNVPPTDAHQEMDTDLSYDENSFDSMINYDVDGRYDDSIEVEDENSEEDGNLDVHINSGP
LGHIMSGLSETETQMTVTDTTAKTELTCQAAMLKNGPVGRGYLTNSCSALDETEKHCMLG
TEFLDSTDVSLSPLHNDANPEDSNKSPQRTFVTDRGDSPSLAAAQNGTRSSNAENGITIV
KEETLNDKLCSSKELGIIPCCISPSNSTTQSNMELPGTNRSSPIRREIPSMHNGPQAQVF
TPSLAKLEVSPLLGAPQPLRTPKQHICLTCGKTFSSASALQIHERTHTGEKPFSCSVCGR
AFTTKGNLKVHMGTHMWNNMPARRGRRLSLDNPVALLGSDALKLTEGFQKDMAARAMSVD
PGFWNHYAAAITNSVAMKSNEISVIHNGGAPNHHGMSVGLDRVNSGLSPPMTNFGKKNND
SPVSQHFSMLIDNSKENCIN
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgccgaaagcaagcgaagccccagcaccttatgtcggaaaagacggcgctcacg
caagtttcctcagatgaaggcatcttgagaggatcggatcaggagaacagagagaactac
ggtggccatgaagggacacatgcttctgaaagttcccctaaggagttaccgtcgtggcct
cacatgtgtgagcatcatatgacaggcactgaagagtctcctaccctcatcatgcaagag
cacatggaaacacctctatccttggaacccccaccacagatttccaacagcatcaccgat
acggcagacaacatggatgcaactgaacccaaatggactgagcagatccagcagaactca
atggaccctgtgcagagcactaagggaaaggttgacaaccgcatggatgtggttctggaa
ccagaatttcaaacgtatcccgaggcacagaagtgtccatatttgtccgttcctgaggtg
gccggtcctctggtacagcctccttccaccatggtatgctacggtgcgcccagcaccaat
gtaactctagagatcctgcagagcaccagggtggctgtggcccagttctcccagagggtc
cactctgagagtctccgaggcggggagagtgctgccccgctccccatcattttggatcgc
ttattggacctgcagcggcagcagatccaacagctgcagctcatcgaacagatccgcaat
caagtggccatgttgaacaagcagcccatgcagacagcacagaatctgacttccaaagga
ctttcctcaacgtctggtcctcaccagttgcaggcaatgctgacccaacccatgttcccc
ctcttgggactgctgccccccaatgcaaatggacaagtgtctggggtggagacagctgcc
tcgtcactctccttacatcctaagactggacagtcagacagtgccatcagatccatggtc
tcattgcccagttctaaccacttgtcatctgttctaagtatggcttcctctgccttgcct
ccatacagtggtagcacaacacctgtcactggaagtcagacaaatggctcttcagttgtg
cactctgtggaaccaaacaatgtccagactagtcatcagtcctccagccttcctttgctc
cctctgagcccacctggaggcatcattttccccaaccccttggctagcataatggccacg
accaatgcactggatcccctgagcgctcttatgaaacagcgaaaaggcaagctctccaat
gtctccatattcgatagcaagccgagctcagatgactccttcttcaagcacaggtgtagg
ttctgtgccaaggtgtttggcagcgacagtgccctgcagatccacttgcgttcccacaca
ggggagaggccattcaaatgcaacatatgtggaaaccgcttctccaccaagggaaacctg
aaagtccacttccagcggcacaaagataaatacccccatgttcagatgaacccttacccc
gtgcccgaatacttggacaacatccctacaagctctgggcttccttatgggatgtccctt
cttccagacaaagcactgagcacatggccagacagcaggcctttaatagcatctggccac
gtgtctgctggtcttcatcttccctcaacttttaatggtgcagaaaggtccactgattct
ctgagtaatgcttcctcagcaggatctcctctaaaagcctccagtgccccaagtgaatat
acctctttgtctcctaatcctactgaatcaaggaaacctgtggatacagtgtccacacca
tgtagtcaggtgggagaggtttcctcaatctacttgactggggcagctgaaagatttacc
tctcaaaatggccttccaacacaaaatgcaaatatgactacagtgtcttcagaatcttct
tccattcaatccacttcacccaggtcttccttacaatcctgcaactcagatcagccgtac
agcaaacttcaaatggacgtagatcccatggaaacctcagaaacctccaagctgcagcag
ctagtggaaaacattgataaaaaagtgtcagatcccaacgagtgtgtgatatgccaccga
gtgctcagttgtcacagtgctctgaagatgcactaccgcattcacacaggtgagagaccg
ttcaagtgtaaagtgtgtggccgagcgttctccaccaaggggaacctgaagactcacttt
ggggtccaccgtgccaagcctccactctgggtacagcattcttgtccgatatgccagaag
aagttcacaaatgctattgtgctgcagcaacacattcgcatgcatatggtgggccatata
ccaaatgtgcctccaacagatgctcaccaggaaatggatacagatctttcctacgatgaa
aacagctttgacagcatgattaactatgatgtggatggtcgatatgatgactccattgag
gtggaagatgaaaacagtgaggaggatggaaatcttgatgtacacataaactctggccct
ctgggccatattatgtcaggcctatctgagacggaaacacaaatgacagtgactgacaca
acagccaagacagagcttacatgtcaggccgcaatgttgaaaaacggacctgtgggccgt
ggatacctgaccaacagttgctcagccttagacgagacggagaaacattgtatgcttgga
actgaattcttagattccacggatgtctctttatctccgctccacaatgatgctaaccca
gaagacagcaacaaatcacctcaaaggacttttgtcacagatagaggtgattcacccagc
cttgctgctgctcagaatggtacacgtagcagtaatgctgaaaatggcataactattgtg
aaagaggagactctaaatgataagctttgttcaagcaaggaactcggaataatcccttgt
tgcatcagtccatcaaatagcaccacacagagcaacatggagctccctgggaccaacagg
tcatcacccattaggagagaaatacccagcatgcacaacggtccccaggcccaggtattc
acaccctccctggccaagcttgaggtctcacctctcctaggagcccctcaaccactccgc
accccaaaacaacacatttgcctgacgtgtgggaaaacattttcgtcagcgagcgcacta
cagattcatgagcgaacacacactggagagaagccgttcagctgctctgtctgtggtcga
gcttttaccacaaaagggaatctcaaggttcacatgggcacccacatgtggaataacatg
cctgcccggagaggacggcgcctgtctctggacaacccagtagccttgctgggatcagac
gctctcaagttaacagaggggtttcagaaggacatggcagcaagggccatgagtgtggac
cccggcttctggaaccactacgcggcagctatcaccaatagtgtggctatgaagagcaat
gagatttctgtcattcacaatggtggcgctccgaaccaccatgggatgtctgtgggcttg
gacagggtgaattcaggactcagtccaccaatgactaactttgggaaaaagaataatgac
agccctgtaagccagcacttctcaatgcttatagacaatagcaaagaaaattgtatcaat
tag
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integrated database retrieval system
