Alosa sapidissima (American shad): 121695531
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Entry
121695531 CDS
T11137
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03013
Nucleocytoplasmic transport
asad03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121695531 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121695531 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121695531 (nup153)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121695531 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
121695531
NCBI-ProteinID:
XP_041932395
LinkDB
All DBs
Position
21:12179084..12201382
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AA seq
1503 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKGKQQAGLISRVTDTVKSIVPSWLQKYFRNGEVAEGSA
TAATRLAPELNSQDPPANGNQESSPHGRDSPEPSTSNTEPSTSRASLNFQDVLSRPPLNR
SHLHFASLDGSPALGGSSSLFPQPSTSTAAPFGSPFASTSNFSLVKEIKDSSSQHEDDNI
STTSGFSSRASDKDVPTSKPAPLLWSPETDRSHSGTQPSQAGLKKPSFNLSVFGTSGLST
MNSSMLNSSQLGDSPYYPGKTTYGGASASRNARSRPSTPYQVPVRRQIKAKPAGTQPCGV
TSATARRILQSLERMSSPLADAKRIPSTISSPLSRPLDRTDLDASPFQVKKKKMDTSLPP
VQKLVVPSAATASGNRSMAFRPSLTPGGVNRALERTASRDTPVRRSPLIPEAAPTTSQST
SSPAYPLSSTPTVSSAGSGGGKMKRERAVRPSTKRSEDEVAEVPDLPAISLPISTRALPT
FSFSSPSTTTSTPTPAPAKTAPAETVTKKDPPPPSSPPSVPFTFASPIVKATAASPQSFS
PSSGFTFSAPVMKTDLTVSNNSAAASPITVTVKSTANTETKEEFSGPFKPAKTLKQGSVL
DLLKSPGFSSSSPTSTPSSQPAPSLPSVSGFGDKFKPPAGSWSCDTCMLQNSAVDTKCVA
CQTSKPQTDSSSSSSSSSSSSSKSDSKPPVSTTSASSTGLAALFAPPKGTWDCDTCLVQN
KPDALKCVACDTGKPGTGVKPGLTLPAFSTSSFCAATTAAAATTTSSSSTSSGLLGFGDK
FKKPEGSWDCDTCMVQNKAQDTKCVACQSAKPGASGAAPASLPALSSSSSSAAPLLGFGD
KFKKAAGSWECDVCCVQNKAEDLQCVACQSSKPGAKPEPKASFGTSTLTNSSSGGFKFGS
NNTTASSGIKFGGTISDSSSAPSGGFKFGGASSDSTGGLKFGGASETTSSSSSSSGGFKF
GSATTTEASSTTNGTPSGVFSFGIASSSSSTSITTTTEDSKTTDAPSLGGGFKFGASNLT
FGTTSTAPATEASVGPAPAADSSDTGFSFGLSKPEEKTSATPSPTFSFSTPQDATATVHA
TSTPATTAASLTSLPIFGKLSGLEPATSAPSLLSTAKFGEPESSEPALSAPVFSFGKPEE
KEASSTSAPTAGFLFGAGKEAEKAPSTTAAPSVGFSFSKPEVAVEPKPVFAFGKPAEKSE
AEAPKPSFAFGQTSTDASAAKPAFGFMSAAPSSTASSTPPAPSLFGAVASSTTALASTPA
PTPASVAAPAPSSTFLFGQSAASEAPPTKAFLFGQQAQETPAAPSATPAQPFMFGASATA
NAPSFTFGATSSSTPASAAPSPFAFSPATSTTGFGSTQASIFGQGTSQPAAPAFGSATSS
FSAGSQPPAFGAKPTAAPVFGQAANATPAFGSANTSTGQGGGFQFGRAGGFVSPASNAGG
VFTFGGAPNPAAPAAPPPTAPGGGFNFVPTPTFNIGSTKSAGTPTGQHGIAGRKIKTAVR
RRK
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccggaggagggaaaattagatcaagaagatatcatatcgcctctaaacca
tatgctaaaggaaaacagcaggctggtctcatcagcagggtgaccgacacagtgaagagc
atcgttccctcttggctccagaagtacttcaggaacggagaagtggccgagggcagtgcc
accgccgccacacgactcgccccagagctcaacagccaagacccgcctgctaacggcaac
caggagagctcccctcacggccgtgactcgcccgagcccagcaccagtaacacagaacct
tctacaagccgcgcatcactgaacttccaggatgtgctgtcaagacctcctctcaaccgt
tcccacctacactttgcctcgctggacggctccccagccctgggtggctccagctcactg
ttcccccagccctccacctccaccgctgccccgttcgggagcccctttgcctccacctcg
aacttctccctggtgaaggagatcaaggactccagctctcagcacgaggatgacaacatc
tccaccacgagtggcttctcatcacgtgcctctgacaaagatgtgcccacctcaaagcct
gccccgctgctttggtccccagagacggaccgctctcactcaggcacgcagccctcccag
gccggcctcaagaagccctccttcaacctgtcggtgtttggcacctctggtctgtctaca
atgaacagctccatgctgaactccagtcagctgggtgactcaccctactaccctggcaaa
accacttacggaggcgcctctgctagccgcaatgcccgctctcgcccaagcaccccttat
caggtcccagtgaggagacagataaaggcgaagcctgctggcactcagccctgcggggtg
actagtgccacagcccgccgcatcttgcagtccctagagcgcatgtccagtcctctggcc
gatgcaaaaagaatcccctcaaccatatcgtcacctttgtcaagaccactggatcgcaca
gacttggatgcttcacctttccaggtcaagaagaaaaagatggacacgtcgctgccgcca
gtgcagaagctggtggtgccgtcagctgccaccgcctctgggaaccgttccatggcgttc
cgtccctctctcacacctggtggagtcaatcgggcactcgagaggacagcctccagggac
acgcctgtgagaagatctcccttaataccggaagctgcaccaaccacgtctcaaagcaca
agctctccggcctaccccttgtccagcacccctacggtcagtagtgctggctccggagga
ggcaagatgaagcgggagagagcagtcaggccctccaccaaacgctcagaggatgaggta
gcggaggtccccgacctgcctgccatctccctccccatcagcacacgtgcactgcccact
ttcagcttctcctccccatccaccaccacttccacacccacacctgcccccgccaaaacg
gcccctgccgagacggtcactaaaaaggatccgccgccaccatcctcacccccttctgtg
cccttcactttcgcttcccctatcgtcaaggcgacagctgccagccctcaatctttctct
ccatcttctggtttcactttcagcgctccagtcatgaagactgatctcaccgtgtctaat
aactctgctgctgcttcgcccatcactgttacagtgaagagcacagcgaacactgagacc
aaagaggagttttcgggccccttcaaaccagccaagaccctgaagcagggcagcgtgctg
gatctcctcaagtctcctggtttctcttccagctcccctacctccaccccctcctctcag
cctgcccccagcctcccctctgtctctgggtttggggacaagttcaagcctccagcgggc
tcctggagctgcgacacctgcatgctgcagaactctgcagtggacaccaaatgcgtagct
tgccagacctccaaaccacagacggactcctcctcatcctcctcgtcttcgtcatcctcc
tcctctaaatcggacagtaaaccccccgtttctacgacatcggcctccagtacggggttg
gcggccctgtttgcccctccaaagggcacgtgggactgcgacacttgcctcgtgcagaac
aagccggacgcactcaagtgtgtggcctgcgacactggcaagcctggcaccggcgttaag
cccggcctaacacttccagcgttttcgacatccagcttttgtgctgccacaactgctgct
gctgctaccaccacttcttcatcgtccacctctagtggactgttgggatttggggacaag
tttaaaaagccagagggctcgtgggactgtgacacttgcatggtgcagaacaaagcgcag
gacaccaagtgtgtggcttgtcagagtgcaaaaccaggagcctctggagcagcacctgcc
tccctgcctgccctgtcctcctccagcagctcagcagcgcccctgctgggctttggggat
aagttcaagaaggcagcaggcagctgggagtgtgatgtctgctgtgtgcaaaacaaggca
gaagaccttcagtgtgtggcctgccagagcagtaagcccggagccaaacccgagccaaaa
gcttcgtttggtacttcgacgttaacaaattccagctctggcggattcaaatttggctcc
aacaataccactgcctcaagtggcatcaaatttggtggaaccatctcagactcctctagc
gccccttctggtggcttcaagtttggaggtgcgtcatctgactccactgggggcttaaag
ttcggtggtgcctctgaaaccacctcctcctcctcgtcctcttctggaggttttaaattt
ggcagtgccaccactacggaggcttcctcaaccaccaatggcactccatcaggggtcttc
tcatttggcatagcctcttcatcctcttccacatcgatcaccaccaccactgaagactct
aagacgacagatgctcccagcttaggcggtggctttaagtttggtgccagcaacttgaca
tttggcacgacgagcacagcacctgcaactgaagccagcgttggtcctgcacctgcagct
gactcctcggacacgggcttctcttttggcctctccaaaccagaggagaagaccagtgcc
accccctcccccacctttagtttctccacccctcaggacgccacagccacagtccatgcc
acctccacccccgccaccactgccgcctccttgacctcgctccccatctttgggaagctc
tctggactcgagccggccacctctgctccttccttgctttccaccgccaagtttggcgag
cctgagagctcggagccggcgctctccgcgcccgtcttctctttcgggaaaccggaggag
aaggaggcatcctccacctcagctccgaccgccgggttcctctttggtgcagggaaggag
gcagagaaggctcccagcaccactgctgccccctctgttggcttctcattcagcaagcct
gaagtagctgtggagcccaaacctgtttttgcctttggcaaacctgctgagaagagcgag
gcagaggcccccaaaccctccttcgcgtttggccagaccagtactgatgcgtcagctgcc
aagccagcctttggcttcatgtctgcagcaccatccagcacagcctccagcacccccccc
gcccccagcctgtttggtgccgtagccagctccaccactgccctggcctccacccctgcc
cccactcctgcctctgttgcggctcctgccccctccagcacctttctgtttggccagagt
gctgcatcagaggcccccccaacaaaggccttccttttcggacaacaggcacaggagacc
ccggccgccccttcggccacccctgcccagcccttcatgttcggcgcatcggccaccgcg
aatgcgccctctttcaccttcggagcaacgtcttcatctacaccggcttctgcagccccc
tcgcctttcgcatttagccctgccacctccaccactggttttggctccacccaggcatcc
atatttggtcaaggcacgtcacagccggccgctccggctttcggctcagccacatcttcc
ttctctgccggatcccagcccccagcgtttggcgccaaaccaacagcagcacccgtgttt
ggccaggcagccaacgctacaccggcgttcggctccgccaacacttccaccggccaaggt
ggaggtttccagtttggtagggccggtggatttgtgtcccccgccagcaatgcaggcggt
gtgttcacgttcggaggggcaccaaatcctgctgctccagcagctcccccacccacagct
cctggcgggggcttcaactttgtcccgacccccaccttcaacatcggatccactaagagt
gccggtacgcccactggacaacacggcatagccgggcgtaagatcaaaacggccgtgcgg
cgcaggaagtag
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integrated database retrieval system
