Alosa sapidissima (American shad): 121695597
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Entry
121695597 CDS
T11137
Symbol
matn1
Name
(RefSeq) cartilage matrix protein isoform X1
KO
K19467
matrilin
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121695597 (matn1)
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
121695597 (matn1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
VWA_3
FXa_inhibition
EGF_CA
cEGF
EGF_3
Copine
EGF_LRP2
BRISC_FAM175B_helical
Motif
Other DBs
NCBI-GeneID:
121695597
NCBI-ProteinID:
XP_041932516
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Position
21:complement(9823284..9829308)
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AA seq
494 aa
AA seq
DB search
MAPGWLQVVCLLLLGMRAAQGTTMDMQNAAAMAAGLCNTRPTDLVFIVDSSRSVRPSEFE
QVKVFLAKVIEGLDVRPDATRVGVVNYASRVKNEISLKATRTKAALTKAVSKIEPLSTGT
MTGLAIQFALNVAFSEAEGARVKSQGVSKVAIIVTDGRPQDNVREVAARARDAGIEIFAI
GVGRVDMNTLKQMASEPLEEHTDYVESYSLIEKLTKKFQEAFCAVSDLCATGDHDCEQVC
ISTPGSFKCACHDGHTLKEDGRTCSACSNSATDVVFLIDGSKSVRPENFELVKKWINQIV
DKLDVAEKGAHVGLVQYSSTVRQEFPLGRFNNKKDLKEAVKKMDYMERGTMTGQALNFIV
ENSFTVNQGARPGVAKVGIVFTDGRSQDYIGDAARKAKENGFKMYAVGVGNAVEDELREI
ASEPIADHYFYTADFKAMTQIAKKLQINVCPEENPCECDSIVKFQKKVEDALQALTKKLE
SVTKRIAALENKIV
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggatggttgcaggtcgtgtgtctgctgctcctcggcatgagggcagcccag
ggaacaaccatggacatgcagaacgccgccgctatggcggcgggtctgtgcaatactcgc
cctactgacctggtgttcatcgtggacagctcccgtagcgttcgtccttctgagtttgag
caggtcaaggtcttcctggctaaagtcattgagggactggatgtgaggccagatgccaca
cgcgtgggagtggtcaactacgccagccgcgtgaagaacgagatatctctcaaggccacc
cgcactaaggctgccctgactaaggccgtcagcaagatcgagccactgtccactggcacc
atgaccggactggccatccagtttgcccttaatgtggccttcagtgaggctgagggagca
cgtgtcaagagtcaaggagttagcaaggtggccattattgtgacagacggacggccacag
gataacgtacgcgaggtggcagcacgagcacgagatgccggcatcgagatctttgctatt
ggtgtgggtcgtgtggacatgaacacactgaagcagatggccagcgagcctctggaagag
cacaccgactacgtggagagctacagcctcatcgagaaactcaccaagaagttccaggaa
gccttctgcgcagtctcagacctgtgtgctactggtgatcatgactgcgaacaggtgtgc
atcagtacacctggatcattcaaatgcgcctgccacgatggccacaccctgaaggaggat
gggagaacctgcagtgcctgcagtaactctgcaactgacgttgtgttcctgatcgatggc
tccaagagtgtgcgaccagagaactttgagctggtgaagaaatggatcaaccagatcgtg
gacaagctggacgtggccgaaaaaggcgcccatgtggggttggtgcagtactccagcacc
gtccgacaggagttccctctgggtcgcttcaacaacaaaaaagacctgaaagaagcggtc
aagaagatggattacatggagcgtggaactatgactggacaggccctgaacttcatcgtg
gagaacagcttcactgtcaaccagggggcccgtccgggtgtagccaaagtgggcatcgtc
ttcactgatggccgctctcaggattacatcggcgatgctgcgcggaaggctaaagagaac
ggatttaagatgtatgcagtgggtgtgggcaatgcggtggaggatgagctgagggagatt
gcctcagagcccattgctgaccactacttctacacggctgacttcaaagccatgacgcaa
atagccaagaagctgcaaatcaacgtttgcccagaggagaatccctgtgaatgtgactcc
atcgttaagttccagaaaaaagtagaagatgctttacaggcattaacgaaaaaattggag
agtgtgacaaagaggatcgctgcattggagaacaagattgtctga
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