Alosa sapidissima (American shad): 121695857
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Entry
121695857 CDS
T11137
Name
(RefSeq) F-actin-uncapping protein LRRC16A
KO
K20493
leucine-rich repeat-containing protein 16
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121695857
Membrane trafficking [BR:
asad04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
121695857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
121695857
NCBI-ProteinID:
XP_041932944
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All DBs
Position
21:complement(20429860..20488553)
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AA seq
1392 aa
AA seq
DB search
MSEENTDISRELMESVRDAVGKKINLSLRKRVSVEVKGDKLEKRILALASHRAYLLTARV
PSKVEQSFNYLDIQSISSFKPDQLVVKHERGLVSFKLASAEEVDEVVAQVGRGLQRICPS
LSPGEVMKKVSLKPEDRMTALLSKWEDQLPVDCGPCGGFSHTYWCMCDQLGLPYRDEVQW
DVDTIYLTQDTRELNLQDFIHLENRDLVIIVAALEYNQWFTKLSVKDYKLSADLCEQILR
VVSRSVRLEELVLDNASLKADFAQKLAIALSHNPKSALHTLNLANNSLEDKGIAALSSPL
AKQTRLKYLNLSRNSLSSKGVNILAQSLIANPSMASTLTHLDLSGNALRGDDLANLCNFL
GQPNSLQTLDLSNSDCPLELICSSLLRGCLKNLSVLNMCKSVFSHRKGKDIPPSFKQFFN
SALALSTINLSGTKLPPEALKALLLGIASNTNLKEVSLDLSNSELRSAGSQIMEGCIAEI
TNISSLDISDNSFDTDLTTLLVWLAKNRSIRHLSLGKNFNNIKSKNLGQVLSNLVHMIQE
EESPLTSLSLADSKLKGDLSFVLNALGSNTSLTKLDISGNGMGDMGAKMLAKALQINTKL
RTVVWDKNSVSPQGLQDVAAALEKNYTIRFMPMPIIDAAQALKASPEKTEDALLKMEQYL
LRNHETRKYLQEQAYRLQQGIVTTTTHQMIERMCVKVQDHLNSLRYSETDPIQEDMRVAE
KLLKDARNSKTLLPNMYHLTTSRNEEIAEGPCIGPIQDKLQSMAGEVTGVMEQQLQNLLQ
SMVDAAESLCPNVMKKPNLRQKLVRASASKMAVPRDFVSTTLLEQSAVDIINKISEVKLS
MASFLSDQIEDEILEALSHSQQTLSEHLNRRAQPLLHHDSQETEVLEESILQPESHSSET
EEMEDLDSCLLTPKSKRKSILYRMLRPISVAFEMEFDLDKALEDVPIHVEDPPLPPPPHP
KLEKKPSGVFGDLPSAEVTSLQHITKLRPKKNKMTKPSRAPATASSPALEVDQNGVVVKV
DEGMDDFFSKKVTKLSFKRLTQKSSPSLQDGDRKRESRMSGLFNRIKPRSKLEKSHAASA
TPTTPQHTPVLSPTTTATPLPPAPTPDPEELTPPRPPVKTAILPPVPEPDFIFTPADPEH
PEEPVTSDSKEAEAMRKHSPLMGRHMGVQVMGNDFLAEMRAKQERKAAATMKVSEPSSPE
KTELTEAQGPTPPPTSAKPSIGIPKPPIQNTKSALGPRTSGPLKTRTNSSRSIDDSPDSP
SGGSSPKMPSLTQVPVPAQRHKRAPSDTERENVTSPPPEDPDSREFPSEIAGDSSVFDGD
LDSAPVKHSSSLRCSTNPVVEADERQRIKSLPTPVKLFPEDDPVPSPGLPPPPLDLPEPI
PEDQTPDPDASA
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggagaatacagacatttctagggaattaatggagagtgtgagagatgctgtc
ggtaagaagatcaacctctctctcaggaagagggtcagtgtggaggtcaaaggagacaag
ctggagaagcgcattctagcgttggcttctcatcgggcctaccttcttactgcacgagtg
ccctccaaggttgagcagtctttcaactatctggacattcaaagcatcagcagtttcaag
ccagatcagctggtggtgaagcatgagcgcggcctggtgtccttcaagctggccagcgct
gaggaggtggacgaggtggtggcccaagtgggccgtggtctccagaggatatgccccagt
ctgtctccaggggaggtcatgaagaaagtgtctctgaagccagaggacaggatgactgcc
cttctctctaagtgggaagaccagctgcctgtcgactgcgggccgtgtggtggattttcg
cacacatactggtgtatgtgtgatcagttgggtcttccgtacagagatgaagtgcagtgg
gacgtagatacaatatacctaacccaagacacaagggaactgaatctgcaagattttatt
catctagagaacagagatttggttatcatcgtcgctgctctggaatacaaccagtggttc
actaagctctctgtgaaggattacaaactgtctgcagacctttgtgagcagattctccga
gttgtgtcacgctcagtgcgacttgaggagctagtcttggacaatgccagtctcaaagca
gattttgcacagaagctggccattgctctcagccacaaccccaaatccgctctccacacc
ctcaacctggccaacaactcactggaggacaaaggcattgctgctcttagttctcctctg
gccaaacaaacacggctcaagtatttgaatctttcaaggaactcactgtcatccaaagga
gtgaacattcttgcacagtctctcattgccaatccttccatggccagcacactgacacac
ctggacctgtctgggaatgcacttcggggggacgatcttgcaaatctctgcaatttcttg
ggtcagccaaatagcctacaaacactggatctgtctaatagcgactgccctcttgaatta
atatgctcttcgctgcttcggggatgtctcaagaatctttcagttctcaacatgtgtaaa
agtgttttttctcataggaaggggaaagacatcccaccctcttttaagcagttcttcaac
agtgcattagcactgagcaccatcaacctgtcaggcacaaagttacccccagaggcactg
aaagcccttctgctcgggattgccagtaacaccaacctcaaagaggtctcgctggatctg
agcaactccgagctgaggtcagccggttctcagatcatggagggctgcattgctgagatc
accaacatttctagcctggacatctcggataacagctttgacacagaccttaccaccctt
ctggtgtggctagcaaagaaccgctccatacgacacctgtccctgggcaagaacttcaac
aacatcaagtccaagaatttgggccaggtcttaagcaacttggtgcacatgattcaggaa
gaagagtctcccctaacgtccctctctctggctgactcaaagctaaagggtgacctctcc
tttgttctcaatgcactgggcagtaacaccagtctaaccaaactggatatcagtggcaat
gggatgggcgacatgggtgccaaaatgttggccaaggccttgcaaatcaacaccaagcta
aggactgttgtgtgggacaagaacagcgtgagcccacaaggcttacaggatgttgcagct
gccctagagaaaaactacaccatccgcttcatgccaatgcccatcatagatgctgcccag
gcactaaaggccagcccagaaaagacagaggatgctcttctgaagatggagcagtatctt
ctgaggaatcatgagacgcgcaaatacctccaggaacaggcctaccgactccagcaaggc
attgtcacgacaaccactcaccagatgattgagagaatgtgtgtgaaggttcaggaccac
ctgaactctctgaggtactctgagactgaccccatccaggaggacatgagggtggctgag
aagctcctgaaggatgccaggaactccaaaacgttactgcctaacatgtaccacttaacg
acgtctcgaaatgaagagattgcggaaggcccttgtatcggtcccatccaggacaagcta
cagtctatggcaggagaggtcaccggagtcatggaacaacaactacagaacctgctgcag
tccatggtggatgcagcggagagtctctgccctaacgttatgaagaaacccaacctgagg
cagaagctcgtacgagccagtgccagcaaaatggccgtaccaagggactttgtctcaacc
accttactggaacagtctgctgtagacataatcaacaagatcagtgaagtgaagctcagt
atggcatccttcctctcggaccaaatcgaagatgagattttagaagctctgtcccattct
caacaaaccctgtcggagcatctgaacaggcgagcgcagcccctgctgcaccacgactcc
caggagacggaggtgttggaggagagcatcctgcagccagagagccacagctccgagacc
gaggagatggaggatctggactcctgcttgctgacacccaaatctaagaggaaaagtatt
ctttacaggatgctaaggcccatctctgtcgcctttgaaatggagtttgatttagacaag
gccttggaggacgtcccgattcatgtggaggacccaccattacccccgccgcctcacccc
aagctggagaagaagccgtccggggtctttggggacctgccttcggcagaggtcaccagc
ctccagcacatcaccaagctccggccgaagaagaacaagatgaccaagcccagcagagcc
ccagccacagccagcagcccagccctagaggttgatcagaatggagttgtggtgaaggtg
gatgaggggatggacgatttcttctccaagaaggtcaccaagctcagttttaagcgcctc
acacagaagagtagcccatctctgcaggatggcgacaggaagcgcgagtcccggatgagc
ggcctcttcaaccgcatcaagccgcgctccaagttggagaagagtcacgcggcttcggcg
acgcccaccacccctcagcacacacctgtcctcagtcccactaccaccgccacaccgctg
ccccctgctcccacacccgacccagaggaactcacacctcccaggcctccggtcaaaacc
gccatccttcctcctgtgcccgagcccgacttcatcttcacacccgctgaccctgagcat
ccagaggagcccgtgacctccgactccaaggaggcagaggccatgaggaagcacagccct
ctgatgggacgccacatgggcgtgcaggtgatgggcaacgacttcctagcagagatgaga
gccaagcaggagcggaaggccgctgccactatgaaagttagtgaaccctcttctccagaa
aagacagagttgactgaagcacagggtcctactcctcctcccacctcagccaaacccagc
atcggcatcccaaagccccccatccagaacaccaagtctgcccttggccctcgcacctct
ggacccctcaagacccgcaccaacagcagcaggagcatcgatgacagtccggattctccc
agtggtggctcgtctccaaaaatgccaagtcttacccaggtgcctgtacctgcccagcgc
cacaagagggcaccctccgacactgagcgagagaatgtgaccagtccaccacctgaagac
cctgacagcagggagtttccctctgagatagctggagacagcagtgtattcgatggagac
ctggactctgctccagtaaaacactcatcctcccttcgctgctcaaccaatcctgttgtg
gaagcagatgagcgccagcgaatcaagtccctccccacacctgtgaaattgttcccagag
gatgacccagtccccagtcctggtctgcctccccctccccttgacctgcctgaacccatc
ccagaggaccagaccccagacccagacgccagcgcatag
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