KEGG   Alosa sapidissima (American shad): 121695917
Entry
121695917         CDS       T11137                                 
Symbol
sox4a
Name
(RefSeq) transcription factor SOX-4a
  KO
K23581  transcription factor SOX4 (SOX group C)
Organism
asad  Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:asad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:asad03000]
    121695917 (sox4a)
Transcription factors [BR:asad03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    121695917 (sox4a)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 121695917
NCBI-ProteinID: XP_041933038
LinkDB
Position
21:complement(16723293..16726704)
AA seq 361 aa
MVEQTSTTDNTDVLPGESGEMDLDMDASPTPGSPSSTGDKMDVAWCKTPSGHIKRPMNAF
MVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDCDKIPFIREAERLRLKHMADYPDY
KYRPRKKVKSSSGKAGDKGDRSSSKCSSKKSSGSKSLSRTHKSGLGSAKSTSPEQVSHSV
PTDHYSLYKTKSASAAKQIPDKPAKRAHSIGGRSHDSSPPSVAVPASPTLSSSAESDPLS
LYEDGVTGKDGDDSPSTLSAGRLNYTRVSSPTPSASHSSSSQSSSDEEFEDDLLDLNPSP
GFDSMSLGSIGSAALDRDLDFNFESGSGSHFEFPDYCTPEVSEMISGDWLESTISNLVFT
Y
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggtggagcagacgagcaccacggacaacactgacgtgcttcccggtgaatctggggaa
atggacttagacatggacgcatccccgactcccgggtccccaagctcgaccggggataag
atggacgtcgcatggtgcaagaccccgagtgggcacatcaaaagaccgatgaatgccttc
atggtatggtcgcagatcgagaggcgcaagatcatggaacagtctccagacatgcacaat
gctgagatttccaagcggcttggcaagcgctggaaactgcttaaagactgcgacaagatc
cccttcatccgggaggccgagcgtctgagactgaagcacatggctgattatccggactac
aagtaccggccacggaagaaagtcaagtcgtccagcggcaaggcgggagacaagggggac
aggagcagcagcaagtgttcatctaagaagtccagtgggtcaaaatccctcagccggacg
cacaagtcagggctggggagcgccaaatcgacttcacctgaacaagtttcacactccgtc
cccacagaccactactccttgtacaagaccaagtcagcctcagcagcgaagcagatacca
gacaagccagccaagcgtgctcacagcattggagggagaagccatgacagcagcccgcct
tccgtggctgtgccagcgagtcccaccctcagcagttcggctgagtctgaccccctcagc
ctgtacgaggacggagtgaccgggaaagatggggacgactccccaagcacactgtcggcc
gggcgcctgaactacacgcgggtgtcatccccgacaccgtccgcctcccactcttcctca
tcacagtcctcctcagatgaggaattcgaagatgacttgctggaccttaaccccagcccc
ggcttcgacagcatgtctctcggcagcataggttcggcggctttggacagagatctggat
tttaattttgagtcgggttctggctcccactttgagttccccgactactgcactcctgag
gtgagcgaaatgatatctggggactggcttgagtcgaccatttctaacttagtattcact
tattga

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