Alosa sapidissima (American shad): 121695978
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Entry
121695978 CDS
T11137
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121695978
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
121695978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
zf-CW
Pyr_redox_2
SWIRM
Pyr_redox
HI0933_like
Thi4
Pyr_redox_3
FAD_oxidored
FAD_binding_3
FAD_binding_2
2-Hacid_dh_C
AlaDh_PNT_C
Lycopene_cycl
NAD_binding_9
MurD-like_N
GIDA
KARI_N
Shikimate_DH
NAD_binding_7
FMO-like
zf-RING_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
121695978
NCBI-ProteinID:
XP_041933178
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Position
21:12361160..12373150
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AA seq
841 aa
AA seq
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MLSDADYGGNASGGRQRGKKRGAAAETTSVDSQPMRSTGRQTNVRVKRSSNNNNNPTGQV
KRKATDTDEEDDQAEKKYRKCEKAGCPATYPVCFASASERCAKNGYTSRWYHLSCGEHFC
NECFDHYYRSHKDGYEKYASWKRVWTGNGKTEPSLKAFMADQQLPYWVQCTKSDCGKWRQ
LTKEIQLTPSLVSTYRCGLKVNNVKTEGPDQCSLPEDMRVAGVSDSWWNSMLIVPPLLKD
SPANPFLTAYYPDCVGMSPSASPSNFAHSDLRTEHRRVVQPQIPGLCPYFQPFYQPNECG
KALCVRPDMMELDELYEFPEFSRDPTMYLALRNLILAAWHRECKEVLTPLKCIPHVIVRG
LVRVRCVQELDRVLHFMTRKGLINTGVLLVKQPTLPEPYHHKKKVLVIGAGASGLAAARQ
LQSFGMQVVVLEARDRIGGRVWDDKSLGVTVGRGAQIVNGCVNNPIALMCEQLGIKMHKL
GDRCDLLLEGGGATDPAIDKRMDFHFNAILDVVSDWRKDKSQHQDAPLGEKIQEVYKTFL
QESGIHFSELEEKVLQFHLSNLEYACGSTLDQVSARSWDHNEFFAQFSGDHTLLTEGYSS
VLHKMAEGLDIHLNSPVQSIDYSGDLVKVMTTSGSQWSAQKVLVTVPLALLQKAIIQFCP
PLPERKLKAIHSLGAGVIEKIVLQFPYRFWDRKVQGADYFGHVPPSPENRGMFSVFYDMD
PKGKQSVLMSVITGEALPTVRDLEDKEVADMCLRVLRELFQDQEVPDYHKFFVTRWSRDA
WAQMSYSFVKTGGSGEAYDIIAEDVQGKVFFAGEATNRHFPQTVTGAYLSGVREASKITA
V
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgacgcagattatggtggcaatgcgtccggtggcagacaacgagggaaaaag
cgaggagccgcggcagaaaccacgtcagtagacagccaacccatgcgttctactggcaga
caaaccaacgtcagggtgaagcgatccagcaacaataacaacaatcccactgggcaggtc
aagaggaaggccacagacacagatgaagaggacgaccaggcagagaagaagtacaggaaa
tgtgagaaggcggggtgcccagccacttatccagtgtgctttgccagcgcctctgaaagg
tgtgccaaaaatggctacacatcgaggtggtaccacctctcctgtggtgaacatttctgc
aatgagtgttttgaccactactatagaagtcacaaagatggctatgagaagtacgcgtca
tggaagagggtgtggacggggaatgggaaaactgagccgagtctcaaggccttcatggct
gaccagcaacttccctactgggttcagtgcactaaatcagactgtggcaagtggaggcag
ctcactaaggaaatccagctcactccatctctggtctccacctaccgctgtggactgaaa
gtcaacaatgtcaagactgaaggaccagaccaatgctcgctcccagaggacatgcgagtg
gctggagtgagtgacagctggtggaactccatgttaattgtgcccccgttactgaaggac
agtccggccaaccctttcctcaccgcctactaccctgactgtgtgggcatgagtccctct
gcgtcgcctagcaactttgcccacagtgacctgaggacagaacacagacgagtcgtacag
ccacagattccaggactgtgcccatacttccagccgttctaccagcctaatgaatgtggc
aaggctctgtgtgtgcggccagacatgatggagctggatgagctctacgagtttccagaa
ttttcccgtgacccgaccatgtacctggccctgcgaaatctcatcctggctgcatggcat
cgggagtgcaaggaggtactcacgccactgaagtgcatcccccatgtgatcgtgcgcggc
ctggtgcgggtgcgttgtgtccaggagctggaccgagtcctgcacttcatgacccgaaag
gggctgattaacactggagtcttactggtgaagcagcccactctgccagaaccgtaccat
cataagaagaaagtgcttgtcattggtgctggagcatcgggattggcagcagctcggcaa
ctccaaagctttggcatgcaggtggtggtgctggaggctcgggaccggataggaggccgc
gtctgggacgacaagtcactgggtgtcactgtaggacgaggagctcagatagtcaacggc
tgtgtcaacaaccccatcgctctcatgtgtgagcagctgggtattaagatgcataagctt
ggtgaccggtgtgacctgctgctggagggagggggcgctacagacccagccatagacaag
cgcatggacttccacttcaacgccatcctggacgtggtgtctgattggaggaaggacaag
tctcagcatcaggacgcccctctgggagagaagatccaggaggtgtataagactttcctt
caggagtctggtatccacttcagtgagctggaggagaaggtgttgcagtttcacctcagt
aacctggagtatgcctgtggcagtacgctagaccaggtgtcggcacggtcatgggaccat
aacgagttctttgcccaattctctggagaccacacgctgctgacggagggctactcttct
gtacttcacaagatggccgagggccttgacattcacctcaactcaccggtccagtccatt
gactactctggagacttagtcaaagtcatgactaccagtggctcgcagtggagtgcacag
aaggtgttggtgactgttccactggctctcctccagaaggccatcatccagttctgccct
cccctcccggagaggaaactgaaggccattcacagcctgggggctggggtcatagagaag
attgtcctgcagttcccctatagattctgggaccgtaaggtccaaggggcggactacttt
ggccatgttccaccaagtccggagaacaggggcatgtttagcgtgttctacgacatggac
ccaaagggtaagcagagcgtgctaatgtccgtcatcactggagaggcactgcccacggtc
agagacctggaggacaaagaggtggctgacatgtgcctgagggtcctgagagagctgttc
caggatcaggaggttccagattaccataagttctttgtgacccgctggagtcgagacgcc
tgggcacagatgtcctacagctttgtgaagacagggggcagtggtgaggcctacgacatc
atcgcagaggacgtccagggaaaagtgttcttcgctggagaggctaccaacaggcacttt
ccccagactgtgactggagcctatctcagtggggtccgagaggccagtaaaatcaccgct
gtctga
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