Alosa sapidissima (American shad): 121696040
Help
Entry
121696040 CDS
T11137
Symbol
tra2a
Name
(RefSeq) transformer-2 protein homolog alpha isoform X1
KO
K12897
transformer-2 protein
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121696040 (tra2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asad01009
]
121696040 (tra2a)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asad03041
]
121696040 (tra2a)
Protein phosphatases and associated proteins [BR:
asad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121696040 (tra2a)
Spliceosome [BR:
asad03041
]
Common components
Common spliceosomal components
SR proteins
121696040 (tra2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
121696040
NCBI-ProteinID:
XP_041933281
LinkDB
All DBs
Position
21:28627543..28635843
Genome browser
AA seq
358 aa
AA seq
DB search
MERKRFQIGGRNGKQKARHENRKNEDRRTIECLKEGVGGMNVSVDSRSPSKSERGSPANA
KSDSRSGSASPSRASKRSESRSRSRSKSRSHSRRHSNRRYSRSRSHSRKKSRSRSYSPEY
RRRKSQSTSPMSNRRRHAGSRGSHGHGKQDKYSGAATGGGMSAGCDELRQKQANPDPNTC
LGVFGLSLYTTERDLREVFSRHGPLAGVNVVYDQRTGRSRGFAFVYYERIDDAKEAMERA
NGMELDGRRIRVDYSITKRPHTPTPGIYMGRPTHNGGGGGGGGSSSSSSGGRRRDDRGGG
YDRGYDRGGDRGYDRGGDRGYDRYDEYDYRYSRRRSPSPYYSRYRSRSRSRSYSPRRY
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaaaaggtttcaaattgggggaagaaatggaaaacagaaagcaaggcatgaa
aacagaaaaaacgaagaccgaagaacaatagaatgcctgaaagagggagtaggaggaatg
aatgtatccgttgactcacggtccccatctaaatcagaacgggggagtccggccaatgcc
aagtcggacagccgctctggttccgcaagtccttcccgagcctccaaacgctccgagtcc
aggtcccgatcaaggtccaagtccaggtcccattcccgcagacactccaaccgccgctac
agccgctcgcgctcccactcccgcaagaagtcccgttcccgctcctactcccctgagtac
cgtcgccgcaagagccagagcacctcgcccatgtccaaccgccgcaggcatgccggcagc
aggggttcccatggtcatggaaaacaggacaaatactcaggagcagccacaggaggaggc
atgagcgcaggatgtgatgagctgaggcagaaacaggccaaccccgaccccaacacgtgc
ctgggcgtgttcggcctgagcctgtacaccaccgagcgcgacctgagggaggtgttctcc
cgccacgggcccctcgccggcgtcaacgtcgtctacgaccagcgcaccggacgctcccgt
ggcttcgccttcgtctactacgagcgcatcgacgacgccaaagaggcgatggagcgagcc
aatgggatggagctggacgggcggcgcatcagagtggactattccatcaccaagcggccc
cacacccccacacctggcatctacatgggtcggcccacacataatggaggtggtgggggt
ggtggcggtagcagcagcagcagcagtggaggcaggagaagagacgaccgtggtgggggc
tacgaccgtggctacgaccgtggcggcgaccggggctatgaccgtggcggcgaccgtggc
tatgatcgctatgatgagtacgactacagatacagtcgcaggcgatctccatctccatac
tacagtcgatacaggtcccgatcccgatctcgctcctacagtccccgacgatattaa
DBGET
integrated database retrieval system
