KEGG   Alosa sapidissima (American shad): 121696075
Entry
121696075         CDS       T11137                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A-like
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:asad00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    121696075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:asad04121]
    121696075
   03036 Chromosome and associated proteins [BR:asad03036]
    121696075
Enzymes [BR:asad01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121696075
Ubiquitin system [BR:asad04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121696075
Chromosome and associated proteins [BR:asad03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     121696075
    Noncanonical PRC1 (PRC1.1)
     121696075
    Noncanonical PRC1 (PRC1.3/1.5)
     121696075
    Noncanonical PRC1 (PRC1.6)
     121696075
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-Nse zf-RING_5 RING_XB3-XBAT31 zf-RING_4 zf-rbx1 zf-RING_6 zf-UDP TRAF3_RING zf-C3HC4_5 SpoU_sub_bind Sina_RING zf-ANAPC11
Other DBs
NCBI-GeneID: 121696075
NCBI-ProteinID: XP_041933332
LinkDB
Position
21:complement(12403913..12410691)
AA seq 386 aa
MANPVNIQAPSKTWELSLYELHRTPQEAIMDGTEIAISPRSLHSELMCPICLDMLKKTMT
TKECLHRFCNDCIVTALRSGNKECPTCRKKLVSKRSLRHDPNFDALISKIYPSRDEYEAH
QRRALDRFKQLHNPQPLILSIEEGIRLQAKYRPLRVRKAQQDDGDNTTFSGDEENADARS
HASHDSAPSHQTSLLTNHAAEAGPSRAKRPHGSDESGPEADGESPTPPRKLQRNSTKSEI
ELVFHPHPLLVNTDLHSQTRYVKTTANATVDHLSKYLALRIALEERQTDRPAEEPGVGET
ADGDEDSRTRAPVRLRDVSEKQYTIYITTSGGQFSTLNGSLTLELVNEKYWKVNKPLELY
YAPTQDQPQQQQQSPPQPEKSSSSQL
NT seq 1161 nt   +upstreamnt  +downstreamnt
atggcaaacccagtgaacatccaggctcctagtaagacctgggagctgagtttatatgag
ttgcacagaactccccaggaagccatcatggatggaacagaaattgccatatctccccga
agtctccatagtgagctgatgtgtcccatctgtctggatatgctcaaaaagaccatgacc
actaaagagtgcctgcatcgcttctgtaatgactgtattgtcactgccctcagatcaggg
aacaaagagtgccctacctgccgcaagaagctggtgtcaaagcgttcgcttcgccacgac
cccaatttcgacgccctcatctcgaagatctacccgagccgggacgagtacgaggcccat
cagcggcgcgcgctggaccgcttcaagcagctgcacaacccacagccgctcatcctcagc
atcgaggagggcatccgcctgcaggccaaatacagacctctgcgggtgcgcaaagctcag
caggacgacggtgacaacacaaccttcagtggtgacgaggagaacgcagacgcccgctct
catgcctcccacgactctgccccctcgcaccagacctccctcctgaccaatcacgccgca
gaggcggggccaagccgagccaagaggccacacgggtccgacgagtcgggtcccgaggca
gacggcgagagccccaccccacctcgcaagctgcagcgcaacagcaccaagtccgagatc
gagctggtgttccacccacaccccctgctagtgaacactgacctgcacagccagacaaga
tatgtcaaaacaactgccaatgccacagtggaccacctctccaagtacctggccttgcgt
atcgccctggaggagagacagacagatcgtccggcggaggagcctggcgtaggagagaca
gcagatggggatgaggacagcaggacaagggctcctgtccgtcttcgagatgtcagtgag
aagcagtacaccatctacatcaccaccagcggcggccagttctctactctgaatggttcc
ctgactctggagctagtgaatgagaagtattggaaggtgaacaaacctctggagctctac
tacgctcccacccaggaccagccacagcagcagcagcagtctcctccacagccagagaag
tcatcttcatcacagctgtaa

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