Alosa sapidissima (American shad): 121696109
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Entry
121696109 CDS
T11137
Symbol
vamp1
Name
(RefSeq) vesicle-associated membrane protein 1
KO
K13504
vesicle-associated membrane protein 2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121696109 (vamp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121696109 (vamp1)
Membrane trafficking [BR:
asad04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
121696109 (vamp1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
121696109 (vamp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
SpoIIM
MCU
EMC3_TMCO1
DUF1676
Orf78
Integrase_H2C2
Motif
Other DBs
NCBI-GeneID:
121696109
NCBI-ProteinID:
XP_041933374
LinkDB
All DBs
Position
21:complement(8441162..8450242)
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AA seq
113 aa
AA seq
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MSAPEATPGAPGEDGAPPAAPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSEL
DDRADALQAGASQFESSAAKLKNKYWWKNMKMMIIMGIIGIILMGVLFMYFYY
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccccagaagccactccaggagccccaggggaagatggagcccctcccgcagcc
cccaacctgaccagcaaccgcaggctgcagcagacgcaggcccaagtcgatgaggtggtg
gatattatgcgtgtaaatgtggataaagtgctggagagggaccagaagctgtcggagctg
gacgaccgggcagatgcactgcaggcaggagcctcacagttcgaaagcagcgcagccaag
ctgaagaacaagtactggtggaagaatatgaagatgatgatcatcatgggtatcattggc
atcatcctcatgggagtccttttcatgtacttctactactga
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