Alosa sapidissima (American shad): 121696300
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Entry
121696300 CDS
T11137
Symbol
syngap1a
Name
(RefSeq) ras/Rap GTPase-activating protein SynGAP isoform X1
KO
K17631
Ras/Rap GTPase-activating protein SynGAP
Organism
asad Alosa sapidissima (American shad)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAB2P_C
PH_RASGAP
p450
RasGAP
C2
PH
PH_2
Exonuc_VII_L
PIN_8
Motif
Other DBs
NCBI-GeneID:
121696300
NCBI-ProteinID:
XP_041933659
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All DBs
Position
21:complement(9204474..9260785)
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AA seq
1514 aa
AA seq
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MALGTNDFLSLSVVQGWRRLMKNVYDEFEEIRHLARRRQESLDPQDCQGFIDSFLIRKES
AETVGNKDSLFHEDNLVYCVANLFAAGTDTTGATLCWGLLLMAKYPQIQDRMQEEIDRVI
GGRQPVAEDRRSLPYTNAVIHETQRVANIVPMSIPHSTSCDVHFQGGLLHQEEHAGAPRS
HFAPARQTSMETPPNAPSQPFRQPSFLSRRLKGSIKRAKSQPKLDRTNSFRHMILPRFRS
ADQERTRLMQSFKESHSHESLLSPSSAAEALDITLDEDAIIKPVHSSILGQEYCFEVTTA
SGTKCFACRSAAERDKWIENLQRAVKPNKDNSRRVDNVLKLWIIEARDLPTKKRYYCELY
LDDMLYARTTSKLRTDTVFWGEHFEFNNLPAIRSLRLHLYKETDKKKRKEKSTYLGLVSI
PISSLTGRQFVEQWYPVIQPSILTKGGGGGGSKIINASIRLKSRYQTMSILPMELYKEFA
EYVTNNYRTLCTVLEPLLSVKSKEEVACALVHILQSTGKAKDFLSDMAMSEVDRFIDREH
LIFRDNTLATKAIEEYLKLIGHRYLKDAIGEFIRALYESEENCEVDPMQTPPSVLPDRQA
NLRMCCELALCKIINSHCVFPRELKEVFSSWRVRCAEHGREDIADRLISASLFLRFLCPA
VMSPSLFNLTQEYPGPRTSRTLTLIAKVVQNLASFSKFGGKEDYMCFMNEFLEMEWGSMQ
QFLYEISNVDCGSNASPFEGYIDLGRELSVLHSLLWEVMAQLSKDAILKLGPLPRLLNDI
SVALRNPQLHRQATQQPEQRPPDRLLTRAATSFNHMVSSDFQSLMMRDLNSSIDISRLPS
PSSGMPSGLAHMGMGPYSERDHRASSKDLFYVTRPPLARSSPAYCTSSSDITEPDQKVLS
VNKSVSMMDLQDSRMNSISNLHSGDMLNSSQASLAGLGSFGVLRGGGRTSAGSGASSMSG
GLRLSHGVTSDALSQQQQQQAAAMHVPLSFQNPLFHMAAADGPLLHHVQAHAHGHGHGHG
HGHGHGHGQPHSYPPHPQPPSQPAPGPQTHPPPLLLAPEPENGPPGYMPAFGRGGFSRSE
DHAGMRPQSSLVQPSIIHSHSYSDDFTRQNQDAEYVRRQLSLQVQENLQQQVLMGMAPST
ATGMGTPASIATPPTTIHPVRQASVSPLAPPPPPRIKPQPPHQLSVGSAATSTPPKARPQ
SGNLLQSPESSYGARPQPRQQLSVKDSPAPGLPHQPSVAQETPAQEGATESTDTPKKNQT
AKSPQQQQLLKPTNAKPGAKSPSTLTPSSAASERTVAWVSNMPHLSADIESLRVDREEFK
LKEHSKSMDESRLERVREYEEEIHSLKERLMMSHRKLEEYERRLMSQEHQTSQILQQYQC
RLDDSERKLRQQQMEKDSQIKGIMNRLMAVEDELRTGPVPEVKTRLFPEQEEQYSSLGSV
DPCHVPGGIPGSGPSSLGTSSAGSPWNSALPPLPPRLLISHNGGLPSSGIAMTAGSTATW
STDRAPGFTGERVA
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggccctggggacaaatgactttctcagtctgtcagttgtgcaaggctggagacgtctg
atgaagaatgtgtatgatgaatttgaggagattagacacctggccaggagacggcaagag
agtttggaccctcaagactgccagggcttcattgactccttcctgatccggaaagagagt
gctgagacagtgggcaacaaggactcccttttccatgaggacaacctggtctactgtgtc
gctaacctgtttgcggccggcacagacaccacgggggctacactgtgctgggggctattg
cttatggccaagtaccctcaaatccaagaccgaatgcaggaggagattgaccgggtgatc
ggtgggcgacagcctgtggctgaggacaggaggagcctcccctacaccaacgctgtgatc
cacgagacccagagagtcgccaacatcgtgcccatgagtatacctcactccaccagctgt
gatgtccacttccagggtggtctacttcatcaagaagagcacgctggtgctcctaggagc
cactttgcccctgcgaggcagacaagcatggaaacccctcccaatgccccttctcaaccc
ttccgacagcctagttttctgagtcgccggttgaagggctcaattaagagggcaaagagc
caacccaaactggaccgtaccaacagcttccgccacatgattctcccacggttccgcagt
gccgaccaagagaggactcgtctgatgcagagctttaaggagtcgcactcccacgagtcc
ttgctgtcccccagcagtgcggcagaagctctggacatcaccttggacgaggatgccatc
atcaagccggtccactccagtattctaggacaggagtactgctttgaggtgaccactgcc
tcagggacaaaatgttttgcctgccgttcagccgcagagagggataagtggattgagaat
cttcaacgtgctgttaaacctaacaaggacaacagccgacgagtcgacaatgttctcaaa
ctgtggatcattgaggctcgggatctgccgacgaagaagcgctactactgcgagctgtac
ctggacgacatgctctacgcgcgcaccacgagcaagctgcgcaccgacacggtcttttgg
ggggagcacttcgagttcaacaacctcccagccatccgcagcctccgcctgcacctgtac
aaggagacagacaagaagaaacgcaaggagaagagtacttacctcggcctggtcagcatc
cccatctccagcctcaccggtcggcagtttgtggagcaatggtaccccgtcatccagccc
agcatcctgaccaaagggggcgggggcgggggcagcaagatcatcaacgcctcgattcgc
ctcaagtcgcgctaccagaccatgagcatcctgcccatggagctgtacaaggagttcgcc
gagtacgtcaccaacaactaccgcacgctctgcaccgtgctggagccgctgctgagtgtc
aagagcaaagaggaggtggcctgcgcactggtgcacatcctgcagagcacggggaaagca
aaggattttctgtcagacatggcaatgagcgaagtggaccgcttcattgatcgagaacat
ctcatcttcagggataacaccctggctacgaaagccatagaggagtacctcaaactaatc
ggacacaggtacctcaaggacgccataggggagttcattcgagcgttgtacgagtccgag
gagaactgcgaggtggaccccatgcagactccgccctctgtgctgccggaccgccaggcc
aacctccgcatgtgctgcgagctggcactatgtaagatcatcaactcccattgtgtgttc
ccccgcgagctaaaggaggtgttctcctcctggcgggtgcgctgcgctgagcacgggcgc
gaggacatcgctgaccgcctcatcagcgcctcgctctttctgcgcttcctgtgcccggcc
gtcatgtcgccgtcgctcttcaacctcacgcaggagtacccagggccgcggacctcgcgc
acgctcactctcatcgccaaggtggtgcagaacctggccagcttctccaagttcggcggt
aaggaggactacatgtgcttcatgaacgagttcctggagatggagtggggctccatgcag
cagttcctctacgagatctctaacgtggactgtggcagcaacgccagccccttcgaaggc
tacatcgaccttggccgggagctctccgtgctgcatagccttctctgggaggtcatggct
caactcagcaaggatgccatactgaagctggggcccttaccccggctactgaacgacatc
agcgtagccctcaggaacccgcagcttcaccgccaggccacccagcagccggagcagagg
ccgcccgaccggctgctcacacgcgccgccacgagcttcaaccacatggtctcgtccgac
ttccagagcctcatgatgagggacctcaacagctccatagacatctctcgactgccctca
ccctcctctgggatgccctcgggcctcgctcacatgggcatggggccgtacagcgagcgg
gaccaccgggcgtcgtccaaagacctgttctacgtgacccgcccgcctctggctcgctcc
agtccggcttactgcaccagtagctcagatatcaccgagcctgaccagaaggtgctcagt
gtaaacaagagtgtgtccatgatggacctgcaggactcgcggatgaacagcatctccaac
ctgcactcgggcgacatgctgaactcctcgcaggcctcactggctgggctgggcagcttc
ggagtcctgcgaggcggtggccgcacgtcggcaggctcgggcgcgtccagcatgtccggc
gggctgcgtctgagccacggcgtcacgtcggacgccctctcgcagcagcagcagcagcag
gcggccgccatgcacgtgccactgtccttccagaaccctctgttccacatggccgccgcc
gacgggccgctgctgcaccacgtccaggcgcacgcgcacggtcatggtcatggtcacggt
cacgggcacggccacggccacgggcagccccactcgtacccgccacacccccagccgcca
tcgcagccggccccgggcccccagacacacccgccgccgctcctgctggcccccgagccc
gagaacggaccgccggggtacatgccagcgttcggacgcggcggcttctcgcgcagcgag
gaccacgcggggatgcggccgcagagcagcctggtgcagcccagcatcatccactcgcac
agctacagcgacgacttcacgcgccagaaccaggacgccgagtacgtgcgccggcagctc
tctctgcaagtgcaggaaaatctccagcagcaggttctgatgggaatggctccgtccacg
gccacaggcatgggcacgcccgcctccatcgccacgcccccgaccaccatccaccccgtc
cgccaggcgtctgtgtcccctctggcccccccgcctccgccgcgcatcaagccccagccg
ccccaccagctctccgtcggctccgcggccacgtccaccccgcccaaagcccggccccag
agcggcaacctgctgcagtcccccgagtccagctacggggcccggccccagccccggcag
cagctctctgtcaaggacagcccggccccagggctcccgcaccagcccagcgtggctcag
gagactccggcccaggagggggcgacagagagcacggacacgccgaaaaagaaccagacg
gctaagtctccccagcagcagcagctgcttaagccgaccaacgcaaagccgggcgctaaa
tctccatctacactgaccccctccagtgcggcgtcggagcgcacggtggcttgggtctcc
aacatgccgcacctctcggccgatatcgagagcctgcgcgtggaccgggaggagttcaag
ctgaaggagcactccaaaagcatggatgagtcccgccttgagagggtgcgcgagtacgag
gaggagatccactcgctcaaggagcgcctgatgatgtctcaccgcaagctggaggagtac
gaacgcaggctgatgtcgcaggagcaccagaccagccagatcctccagcagtaccagtgc
aggctggacgacagcgagaggaagcttcgccagcagcagatggagaaggactcacagatc
aaaggcatcatgaatcggttaatggcggtggaggatgagttgcgcactggccccgtgccg
gaggtgaagactcgtctctttcctgagcaggaagagcaatactcctccctgggctctgtg
gacccctgccacgtgccgggggggatccctggttcgggaccctcctccctgggcacgtcc
tcggcggggtccccctggaacagcgccctccccccgctgcccccccgcttgctaatcagc
cacaatggcggcctaccttcgtcaggcatcgccatgacggcggggagcacggcaacctgg
agcacagacagagcgccaggcttcaccggggaacgtgtagcctga
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