Alosa sapidissima (American shad): 121696307
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Entry
121696307 CDS
T11137
Symbol
lingo4a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121696307 (lingo4a)
Membrane trafficking [BR:
asad04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
121696307 (lingo4a)
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NCBI-GeneID:
121696307
NCBI-ProteinID:
XP_041933679
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Position
21:9178303..9191575
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AA seq
613 aa
AA seq
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MCVEVAFWWAVCWRGLILWAVGLVSVADSLWPCPLRCDCYSEVLMVNCSWRHLASVPEGI
SGDSQRLDLSHNRLKALGRRQFSGLGQLRELDLSDNILTMIEVEAFLGLQNLLTLRMFRN
RLKIITVGVFSGLPSLRLLDISENEILVFLDYTFRELAHLQQMEASENDLVFISQRAFVG
LANLQELNIDRCNLTAIPTDALSQLSGLVRLRLKRLGITALPNNSFRRLGRLRELEVSHC
PWLESLAGNSLFGLNLTSLTLSHCNLSTFPYAALHHLVYLRYLDLSYNPITSIQGKLLGD
LLRLQELHLVGGSLLQVELLAFHGLAYLRLLNISSNQLVTLEEGAFHSVGNLEVLRLDEN
PLACDCRLLWVMRRRLRLDFDANPPTCNAPIQVQGRSFQDFTESEMPGLFTCRPPRILSR
KPQEVRVEEGHTVPLLCKADGDPTPSISWLSPKHTKLSPTGRIRILPDGSLEVRYAQVHD
SGTYLCVASNAAGNDTFPVSLRVRGFPSSGRNRSASYFLDGWSLVTAPTAVNGSSQQTKP
YPFDAKTLVIAVTMGFLSFLSSVAICFVFMLFWSQSKGQIKHTATIDFVPRSSGGGGGGG
GGAEPSKFTMKLI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtggaggttgctttctggtgggcggtgtgctggagaggcctcatcctgtgggca
gtggggctagtgtcagtagccgactccctgtggccctgccccctgcgctgcgattgctac
tccgaggtgctgatggtcaactgctcgtggcgccacctagcgtccgtgcccgagggaatc
tccggagactcgcagcggctcgacctctctcataaccgcctcaaggccctcggccgccgg
cagttctcggggctcgggcagctgcgggagctggacctgagcgacaacatcctgaccatg
atcgaggtggaggcgttcctggggctccagaacctgctcacgctgcggatgttccgcaac
cggctaaagatcatcaccgtgggggtcttctccgggctgcccagcctgcggctgctggac
atcagcgagaacgagatcctcgtcttcctggactacaccttccgcgagctggcgcaccta
cagcagatggaggccagcgagaacgacctggtcttcatctcccagcgcgccttcgttggg
ctggccaatctccaggagctcaacatcgaccgctgcaacttgaccgccatccctacagac
gcactctcgcagctgagcggcctggtcaggctgcggctcaaacgcctgggcatcactgcc
ttgcccaacaactccttccgtcgcctggggcgcctgagggaactcgaggtgtcccactgc
ccctggttggagtccttggcagggaatagcctttttggcctgaacctgacctctctaaca
ttgagtcactgtaatctaagtacgtttccctatgccgccctccatcacctggtctacctt
cgctatctagacctttcatacaaccccattacctccattcaaggtaaactactgggtgac
ctgttgaggctgcaggagctgcacctggttgggggcagtctgcttcaggtcgagctgctg
gctttccatggcctcgcttatctccgcctcctaaacatctcctccaatcagcttgtgacg
ctcgaggagggggccttccattcggtgggcaacctcgaggtcctaaggctggacgagaac
ccgttggcgtgcgactgccgtctgctgtgggtgatgcgtcgccggctgcgcttggacttc
gacgccaacccgccgacctgcaacgcgcccatccaggtgcaaggaaggtccttccaggac
ttcacggagtccgagatgcctggactcttcacgtgccggccgcctcggatcttgagccgt
aagccacaggaggtgagagtggaggagggacacaccgtgccgttactctgcaaggcagat
ggagaccccaccccctccatttcctggctcagccccaaacacaccaagctctctccgacg
ggtcggatacgcattctccccgatggttctctggaggtgcgatatgcccaggtgcatgac
agcggcacttatctgtgcgtggcgtcgaacgcggccggaaacgacacgtttcccgtgagc
ttgcgtgtccgtggcttcccgtcctccggtcgcaaccgctccgcctcgtacttcctggat
ggatggagcctggtgacggcaccgaccgctgtcaatggctcgtcgcagcagaccaaacca
tacccgttcgacgccaagacgctggtgatcgccgtgaccatgggcttcctgtcgtttctc
agctccgtggccatctgcttcgtgttcatgctcttctggagtcagagcaagggccagatc
aagcacaccgccaccatcgactttgtgccgcgctcctcagggggtggcggtggtggcggt
ggaggtgcagaacccagcaagttcactatgaagctcatctga
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