Alosa sapidissima (American shad): 121696900
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Entry
121696900 CDS
T11137
Symbol
pparaa
Name
(RefSeq) peroxisome proliferator-activated receptor alpha a
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03320
PPAR signaling pathway
asad04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121696900 (pparaa)
03320 PPAR signaling pathway
121696900 (pparaa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121696900 (pparaa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
asad03310
]
121696900 (pparaa)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121696900 (pparaa)
Nuclear receptors [BR:
asad03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
121696900 (pparaa)
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121696900
NCBI-ProteinID:
XP_041933935
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Position
22:28790433..28829588
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AA seq
466 aa
AA seq
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MVDMPSPYSPSSIGDSVLVSPLCGDLIQDLGELEDLSQSVEDDSFNSFDIHEHKSSSTGS
ECSTALDFLTPASSPTSVVFGIVTGDEVSSSPLNLECRVCADRASGFHYGVHACEGCKGF
FRRTIRLKLEYDKCERNCKIQKKNRNKCQYCRFHKCLSVGMSHNAIRFGRMPQSEKLKLK
AELETGEKQYVEPQLADVKALIRLIHAAYLKHFPMNKAKARVFLTGKTSAPPFVIHDMDT
LQLAEKTLLIQLFGGSVDAVGLLQRQAEGRLFHCCQCTSVETVTELTEFAKAVPGFQELD
LNDQVTLLKYGVHEALFALLASCMNKDGLLVAQGRGFITREFLKSLRRPFSDMMEPKFQF
ATKFNALELDDSDLALFVGTIICCGDRPGLGNVSHIECIQENIIHALRLHLLANHPDDTF
LFPKLLQKLADLRQLVTEHACLVQEIKKTEDASLHPLLQEIYKDMY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacatgccgagtccctacagtccgtcctctattggagactcggtcctggtaagt
cctctgtgcggggaccttatccaggacttgggggagctagaagatctctctcagtcagtg
gaagatgattctttcaacagctttgatatccatgagcacaagtcttcaagtacaggatcc
gagtgttctactgcattagattttttaacaccagcgtccagtccgacctctgtggtgttt
ggaatagtgaccggagatgaggtgtcctctagccctctaaacctggagtgccgcgtttgt
gctgatcgtgcctcaggcttccactatggggtccacgcatgtgagggatgcaagggcttc
ttcaggaggaccatacgccttaagttggaatacgacaaatgtgagcgaaattgcaagatc
cagaagaaaaaccgtaacaaatgtcagtactgccgattccacaagtgcctttcagttggc
atgtcccacaatgctatccgttttgggcggatgccccagtcagagaagttgaaactgaaa
gctgagctggagactggagagaagcagtatgtggagcctcagctggctgatgtgaaggct
ctcattcgactgatccatgcggcttacttgaagcacttccccatgaataaagccaaagcc
agagtttttctcactggcaagaccagtgcaccgccgtttgtcatacatgacatggacact
ctgcagctggcagaaaagacgttgctgatccagctttttggaggcagcgtagacgcggtc
ggccttttgcagcgccaggcagagggtcggctcttccactgttgccagtgcacgtccgtg
gagacggtcactgaactcacagagtttgccaaggctgtgccaggcttccaggagcttgac
ctgaatgaccaggtgactttgctgaagtacggagtacacgaggcgctcttcgccctgctg
gcctcctgcatgaacaaggacgggctgctggtcgcgcagggcagaggcttcatcacgcgc
gagttcctcaagagtttgcgccgacccttcagcgacatgatggagcccaagttccagttt
gccacgaaattcaatgccctggagctagatgacagtgacctggctttatttgtaggaact
atcatctgttgtggagacagaccaggcctgggcaatgtgtcgcacattgaatgcatccag
gaaaatattattcatgcactgcggctccatctgctggccaaccatccagatgacacattc
cttttccccaagctgttgcagaaactggcagaccttcggcagcttgtgactgagcacgct
tgtctagtacaggagattaagaagacagaagatgcctctttgcacccgctgcttcaggag
atttacaaagacatgtattaa
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