Alosa sapidissima (American shad): 121696969
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Entry
121696969 CDS
T11137
Symbol
fbxo11b
Name
(RefSeq) F-box only protein 11 isoform X1
KO
K10297
F-box protein 11
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121696969 (fbxo11b)
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121696969 (fbxo11b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
zf-UBR
F-box
Motif
Other DBs
NCBI-GeneID:
121696969
NCBI-ProteinID:
XP_041934111
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Position
22:27094013..27107977
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AA seq
879 aa
AA seq
DB search
MNSVRATNRRPRRVSRPRPVQPERNNGERDEDVPADMVAEESGPGAQNSPYQLRRKSLLP
KRSACPTKSSMEGASTSTTETFGHRAKRARVSGKSQDLPAAPAEQYLQEKLPDEVVLKIF
SYLLEQDLCQAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPEPGKFYQINPEEYEQ
PNPWKESFQQLYKGAHVKPGFAEHFYSNPARYKGRENMLYYDTIEDALGGVQEAHFDGLI
FVHSGIYTDEWIYIESPITMIGAAPGKVADKVVIENTRDSTFVFMEGSEDAYVGYMTIKF
NPDDKSAQHHNAHHCLEITVNCSPNIDHCIIRSTCTVGSAVCVSGQGACPTIKHCNISDC
ENVGLYITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMGY
FESCNIHRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAGV
WITSNSDPTIRGNSIYNGNQGGVYIFGDGRGLIEMNDIYGNALAGIQIRTNSCPIVRHNK
IHDGQHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYDN
GHGVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGFIEDNEIFDNA
MAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPVL
RKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIMNNQDAIEK
AVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFC
DCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtcagggcaaccaacagaagacccaggcgagtatcgaggccgcgcccggtg
cagccggaacggaacaacggtgaaagagatgaggacgtgcctgcagatatggtcgcagaa
gaatccggtccaggagctcagaacagtccgtatcaactccgcagaaagtccttattgccc
aagagatcagcgtgtcccacgaagagcagtatggagggtgcctccacatccacgacagaa
acgttcggccacagagcgaagcgagctcgtgtgtctgggaagtcccaggacctacctgcg
gccccagcagaacagtacctccaggagaagctgccagatgaggtggtcctgaagatattc
tcctacctgctggaacaggacctgtgccaggcggcatgtgtgtgcaaacggttcagcgag
cttgccaatgaccccatcctttggaagaggctttacatggaggtgtttgagtacacgcgt
cccatgatgcatccggagccagggaagttttaccaaatcaaccctgaagaatacgagcag
cccaacccctggaaggagagctttcagcagctgtacaagggtgcacatgtgaagccgggc
tttgcggagcacttctacagcaatcccgccaggtacaaagggagagaaaatatgttgtat
tatgacaccattgaggatgcgctgggtggagtccaggaggcgcactttgacggcctcatc
ttcgtgcactcgggcatctacacagatgagtggatctacatagagtcccccataaccatg
atcggagcagctccaggtaaagtagctgataaagtagtgatcgagaacaccagggattcc
acctttgtgttcatggaggggtcagaagatgcttatgttggctacatgaccatcaagttt
aatccagacgataagtcagcccagcaccataacgcccaccactgcctggagatcacggtc
aactgcagtcccaacattgaccactgtatcattcgcagcacctgtacagttggctcagcg
gtatgtgtcagtggccagggggcatgccccaccattaaacattgcaacatcagtgactgt
gagaacgtaggcctatacatcacagaccatgcacagggcatatatgaagacaatgagatc
tccaacaatgcccttgctggtatctgggtgaaaaaccatgggaacccaatcatcaggcgg
aatcacattcatcatggtcgggatgtaggcgtcttcacatttgaccatggcatgggctac
tttgagagctgcaacatccacaggaatcgtattgctggctttgaagtgaaggcctacgct
aatcccaccgtggtgcgctgtgagatccaccacggccagacgggcggcatttatgtgcac
gagaagggccggggccagttcatcgagaacaagatctatgccaacaactttgctggcgtt
tggataacgtccaacagcgaccccaccatcagggggaattccatctacaacgggaaccaa
ggaggcgtgtacatatttggtgatgggagaggcctcatcgagatgaatgacatctatggc
aatgcactagcaggcatccagatccgaaccaatagctgccccatcgtcaggcacaacaaa
atccacgacggccaacatggaggcatatacgtgcatgagaagggccagggcgtgattgag
gagaacgaggtgtacagtaacacgcttgccggagtgtgggtgaccacggggagcacgcca
gtcctccgcaggaataggatacacagcggcaaacaggtcggtgtgtacttctatgacaat
ggccatggagtgctggaggataatgacatctacaaccacatgtactctggagtgcagatc
aggactggcagtaaccctaaaattaggcgcaacaagatctggggtgggcagaacggtggc
atccttgtctacaattctggcctgggattcatcgaggacaatgagatctttgacaacgct
atggctggggtctggatcaagacggatagcaatcctacactgcgcagaaacaagatccat
gatggccgagacggcgggatctgcattttcaatggtggaaggggcttgctggaggagaat
gacatcttccggaacgcacaggctggcgttctgatcagcaccaacagccaccctgtcctg
cgcaagaaccgcatctttgacggctttgctgcaggcatcgaaataacaaaccatgctacc
gccaccttggagggtaatcagatcttcaacaaccgctttggcggtctgtttcttgcatcc
ggtgtcaatgtcaccatgaaagataataaaataatgaacaatcaggatgctatagagaag
gcggtgagccgaggccagtgcctgtacaagatctccagttacaccagctaccccatgcac
gacttctacaggtgtcacacttgtaatacgacggacagaaatgctatctgtgtgaactgc
attaagaagtgtcaccaaggacacgacgtagagtttatacggcacgataggtttttctgt
gactgcggtgcgggaacgctgtccaatccgtgcacgctggcgggagagcccacgcacgac
acagacactctgtacgactcggcgccccctattgagtcaaacacgttacagcacaactga
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