Alosa sapidissima (American shad): 121697208
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Entry
121697208 CDS
T11137
Symbol
rint1
Name
(RefSeq) RAD50-interacting protein 1
KO
K20474
RAD50-interacting protein 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121697208 (rint1)
Membrane trafficking [BR:
asad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
121697208 (rint1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
HOOK
COG4_N
Motif
Other DBs
NCBI-GeneID:
121697208
NCBI-ProteinID:
XP_041934551
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All DBs
Position
22:28879572..28885892
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AA seq
775 aa
AA seq
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MAAPLEEQENCVEREMNSLSVSENTSASDDDEVTDYLMQFVEKEIGCDLKALSKVSGMLE
KLKAENKALEEQVMTASSSVPLRVSAALETAEKSQSNLESLLQKERILSNTLQQHLQGAQ
SWADRLGQTLGQLDTIEKHLKYLQCLARIEELSDSIQQCLMTSSTWEAAGAISTMAKLDV
SLQESGCSHLQAFLRETLRFWHKILKDRLTGDFEEVLTQLQWPFISPPTPSLSPPPNAQE
LNSQLELLVSQLLALQTSDDLISEEPSSRLGFPQSIPLSLPIKIMLVPLSKRFKYHFTGN
RQTNSLNKPEWYLTQVLMWMGNNSNFMEEKIQPILDHSRANINAKVELCRGLLSLAQEKL
ALDASRLLYDDALFCHLVDEVLQFEKELRSTHAYPSTLPGALHILLEEAVLQKWLSVERK
MALEKVDAMLSAEGAWSSQYRDITDMDELKAPDCAETFMTLLLVITDRYRSLPSPRAQLS
FLALQRELVDDFRIRLTQVMKEESRNPLGVRYCAILNAANYISAVLIDWGDNVFFLQLQQ
AAVALGDEVLGPMGATETGRLASLEGSLFEELLGLLERLRGDMMGRLLDTVMRDVREKTQ
TYIRDRWLSLPSQCDQATMSLSSSACPMMLCLRDHLLQLQQLLSLPLFQTFWQGLAERLD
LFLYQDLILYNHFNEGGAAQLQFDMTRNLFPLFGHYCKRPENFFKQVKEACIILTLNVGP
ALLLRDVLREAEDELFVPESLQPSPEAALNELGVYRLPPYDVSILLGLRASWPAQ
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccttagaggagcaagaaaattgcgtcgagagagagatgaacagtctctca
gtgtctgaaaacacctctgcatcagatgacgatgaagttacagactatttaatgcagttt
gtagaaaaagaaattggttgcgacctgaaggcattaagcaaagttagtggtatgcttgag
aaactaaaggctgaaaacaaggctctggaagaacaggtaatgacagcatcgagctcggtg
ccgctgcgcgtgtctgctgcccttgaaactgcagagaaatctcagtccaacctggaaagt
ttacttcagaaagagaggatactctctaacacattgcaacaacatcttcagggtgcacag
agttgggcagacagacttggacaaacactcggccagttggataccatagagaagcacctg
aaatatttacagtgtttagcccgcatcgaagagctcagtgacagtattcagcaatgttta
atgaccagtagcacatgggaagctgcgggggccatcagcactatggctaagttggacgtg
agcctgcaggagtcaggctgtagccatctgcaggctttcctcagagaaacactacgattt
tggcacaagattctaaaagacagacttacaggggactttgaagaggttctcacacagttg
caatggccttttatctctcctccaactccttccctctctccacctcctaatgcccaggag
ctcaatagccagctagaacttctggtatctcagctcctggccctgcaaacctctgatgat
ctaatatcagaggagccatcctctcgtttgggctttccccagtctatacccctctctttg
cccataaagattatgctggttcctctcagtaagcggttcaagtaccacttcactgggaat
cggcaaactaactccctaaacaagccagagtggtacctaacccaggtcctcatgtggatg
gggaacaactctaacttcatggaagagaagattcagcctattctggatcactcacgagcc
aacatcaatgctaaggtggagttgtgccgaggcctcctctctctcgctcaggagaagcta
gcgttggatgcctcccggcttctgtatgatgatgctctgttctgccacctggtggatgag
gtgctccagtttgaaaaggagctgcggagcacacatgcctaccccagcaccttacctggt
gccctgcacatcctgctggaggaagccgtcttgcagaagtggctcagtgtggagagaaaa
atggcacttgagaaagtggatgccatgctgtcagcagaaggagcttggagttcccaatac
agagacatcacagacatggatgagttgaaagctccagattgtgcagagacctttatgaca
ctcctgttggttattacagaccgttaccgctccctgccctcccctcgagcgcagctcagc
ttcctggcgctgcagagggagctggtggatgacttccgtatccgactgacacaagtcatg
aaagaagagtctcggaacccactgggcgtacgctactgtgccatcctcaatgctgccaat
tacatttctgcagtgcttattgactggggtgacaatgtattcttcttgcagctgcagcag
gctgctgtggctcttggtgacgaggtgttggggcccatgggggccacagagacaggccgc
ctggcatctctcgagggctctctgtttgaagaactgctgggattgctggagcgactccgt
ggggatatgatgggccggctgctggacacggtcatgagagatgtgcgggagaaaacccag
acctacatacgagacagatggctttccttgccctcccagtgtgaccaggcaaccatgtct
ttgtccagttctgcatgtcccatgatgctttgcttgcgggaccatttgctacagctacag
cagcttctgagtctgcctctgtttcagacgttctggcaaggtttggctgagaggctggat
ctcttcctttaccaagaccttatattgtacaaccatttcaatgagggtggggctgcacag
ctacagtttgacatgaccaggaacctgtttcctctgtttggacactattgcaagagacca
gaaaacttcttcaaacaggtgaaggaggcttgcatcatcttgacgctgaatgtgggccct
gccctgctactgcgggatgtccttagagaggcggaagacgaactgtttgttccagagagt
ctgcagcccagccccgaggctgccctcaacgagctgggtgtgtatcgtctgcctccgtat
gacgtctccatcctgctggggctcagggcatcatggcctgcgcagtaa
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