Alosa sapidissima (American shad): 121697250
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Entry
121697250 CDS
T11137
Symbol
pacsin2
Name
(RefSeq) protein kinase C and casein kinase substrate in neurons protein 2 isoform X1
KO
K20123
protein kinase C and casein kinase substrate in neurons protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121697250 (pacsin2)
Membrane trafficking [BR:
asad04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
121697250 (pacsin2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCH
SH3_1
SH3_9
SH3_2
Cluap1
Sec10_N
fvmX2
DUF5663
SH3BP5
FapA
CHIP_TPR_N
Motif
Other DBs
NCBI-GeneID:
121697250
NCBI-ProteinID:
XP_041934620
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Position
22:complement(18327642..18356389)
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AA seq
509 aa
AA seq
DB search
MSGTYNDSLTDVSSDSFWEVGNYKRTVRRVDDGNRLCNDLMNCIHERARIEKAYAQQLTE
WSKRWRQLIDKGPQYGTLEQAWIAVMTEAEKVSDLHMDVKSALMGEDFEKVKNWQKDAYH
KQMIGGFKETKEAEDGFRKAQKPWSKKLKEVDTMKKAYHAACKEEKLATSRENNSKLESN
SNPDATKKLQEKVEKCQQDVQKTKERYEKSLEELDKVTPQYMENMEQVFEQWQQFEEKRI
SFFKELLLDVKQHLDLSSNHKFQTVYHTLEDTVKSADAEEDLKWFRNNHGPGMHMNWPQF
ESWKSLGADTGSVLTFGPSFLKEWSIDMNRTLSRRDKKKPGEGVMLTGISQTGDQPAKSS
SSLAVPRSTEPVGANPFEDDEDEEESPQEQPNSSPTVTVKKDQVATKTASSVDKTQDWSD
EETGNPFAGDAADANGNGNPFEDEPVSPAVSVPVKALYDYEGQEQDELSFKAGDEFIKIG
EEDDQGWCKGRLKDGTMGLYPANYVEDIQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcacatataatgactccttgaccgatgtctccagtgacagcttttgggaggtg
ggaaactacaaacgtacagtgcggcgtgttgatgatggcaaccggctgtgcaatgacctg
atgaactgcatccatgagcgggcgcgcatcgagaaggcctacgcccagcagctgaccgag
tggtccaagcggtggagacagcttattgataaagggccgcaatacggaaccctggagcag
gcgtggatcgccgtgatgacggaggccgagaaggtgagcgacctgcacatggacgtgaag
tcggcgctgatgggtgaggactttgagaaggtgaagaactggcagaaggacgcctaccac
aagcagatgatcggcggcttcaaggagaccaaggaggccgaggacggattccgcaaggcc
cagaaaccctggtccaagaaactcaaggaggtggacacgatgaagaaggcgtaccatgcg
gcctgtaaggaggagaagctggccaccagccgagagaacaacagcaagctggagagcaac
tccaaccccgacgccaccaagaagcttcaggagaaggtggagaagtgccagcaggatgtt
cagaagactaaggagcgttatgagaagtccctggaggagctggacaaggtgacgcctcag
tacatggagaacatggagcaggtgtttgagcagtggcagcagtttgaagagaagcgcatc
agcttctttaaagagctgctgcttgatgtcaagcagcacctggacctctccagtaaccac
aagttccagacagtctaccacacactggaggacacggtcaagtcggctgatgccgaggaa
gacctcaagtggttccgcaacaaccacgggccgggcatgcacatgaattggccccagttt
gagtcctggaaaagtcttggcgctgacacggggtcagtcctgaccttcgggccttcgttt
ctgaaggagtggtccatagacatgaaccgcacgctgagtcgcagagacaagaaaaagccg
ggtgagggtgtgatgctcacgggtatcagccaaacaggagatcagccagccaagagcagc
agcagcctcgctgtgcctcgtagcacagagcctgtgggcgcgaatccatttgaggatgac
gaggatgaggaagaatcgccccaggaacagcccaacagcagcccgacagtcactgtcaaa
aaagaccaagttgccaccaaaactgccagcagcgtggataaaacccaggactggtcggac
gaggagacagggaatccctttgctggtgatgccgctgacgccaacggtaacggcaaccca
ttcgaggatgagcctgtctctccagccgtctcggtgccggtgaaggcactctatgactac
gagggccaggagcaggatgagctgagcttcaaagcaggggatgaattcattaagattggc
gaggaagatgaccagggctggtgcaaagggcgactgaaggacggcactatgggtctctac
ccagccaactatgtggaggacatccagtag
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