Alosa sapidissima (American shad): 121697294
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Entry
121697294 CDS
T11137
Symbol
gart
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00230
Purine metabolism
asad00670
One carbon pool by folate
asad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
121697294 (gart)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
121697294 (gart)
Enzymes [BR:
asad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
121697294 (gart)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
121697294 (gart)
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
121697294 (gart)
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp
CPSase_L_D2
ATP-grasp_3
ATP-grasp_4
Dala_Dala_lig_C
ATP-grasp_2
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-GeneID:
121697294
NCBI-ProteinID:
XP_041934688
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All DBs
Position
22:12312547..12334994
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AA seq
1017 aa
AA seq
DB search
MAERVLVIGSGGREHALAWKLAQSPHVQQVLVAPGNAGTASCGKISNSEVSVSNHSILAQ
YCKDHNVGLVVVGPEVPLAAGIVDDLVAAGVPCFGPSAKAAQLEASKSFSKSFMDRQGIP
TARWSSFTDPQEACRYIKGADFPALVVKASGLAAGKGVIVAQDKEEACRAVEEIMKDKAF
GSAGETVVVEELLEGEEVSCLCFTDGTTIAAMPPAQDHKRLLDGDRGPNTGGMGAYCPTP
QVSEVTLKQIRETVLQKTVDGMREEGTPYVGVLYAGLMLTPQGPKVLEFNCRFGDPECQV
LMPLLKSDLYEVLRDTLQGKLASSSPVWHENVAAVTVVMASPGYPGAYKKGIELTGLSQV
QDMGLQVFHAGTALKEGGVVVTSGGRVLTVTAVMPSLDGALHKANQGVASVGFPDAAYRR
DIGHRAITYLTRSRGLTYKDSGVDIAAGNRLVDLIKPLAKATTRAGCNAELGGFAGLFDL
KAAGFSDPVLVSGTDGVGTKLKIAQACGQHGTLGQDLVAMCVNDVLAQGAEPLFFLDYFS
CGQLDVGVASTVIGGIADACKMAGCALLGGETAEMPGMYAKGEYDLAGFCVGAVERSSVL
PRLGDISEGDLLIGVASSGVHSNGFSLVRKVLEQSGLQYSSPAPFGKAGETMGTVLLTPT
KIYSRLLLPILRSGAVKAYAHITGGGLLENIPRVLPKELAVDLDATRWHIPPVFSWLQDA
GGLSEEEMGRTFNLGLGAVLVVARPDAQRVLRQLQAHEQAWIVGSLAHKQPGSEPVVIRN
LSASLRAGPEANPDTSALPNGAAHSDHTQRRRTRVGVLISGTGTNLQALMEQVKKPSSAA
EIVVVISNRPGVLGLKRASMAGIQTRVVDHKLYGSRSEFDSTIDRVLEEFGVEVVCLAGF
MRILTGTFVKKWNGKLLNIHPSLLPSFKGVNAQKQALQAGVRVAGCTVHFVAEEVDAGAI
IVQEAVPVLMNDTEDSLSERIREAEHQAFPAALELVAGGAVRLAEDGRIIWNSMMQV
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcgggtgttggtgattggcagtggaggacgagaacacgccctggcctggaag
ctggcccagtcgcctcatgtccagcaggtcctggttgcccctggtaatgctggcactgcc
agttgtgggaagatctccaactcggaggtgtctgtaagtaaccattccatcctggcccag
tactgtaaagaccacaacgttggcctggtggtggtcggaccggaggtgccccttgctgca
ggcattgtggatgacctggtggctgctggagtcccgtgtttcggcccctccgccaaagcg
gcccagctagaggccagcaagagcttctccaagagcttcatggaccggcagggtatcccc
actgcgcgctggagctccttcactgatccccaggaggcctgccgctacatcaagggggca
gacttccccgccctggtggtgaaggccagtggtctagcagcaggtaaaggagtcatcgtt
gctcaggacaaggaggaggcatgcagagcagtggaggaaatcatgaaggacaaggcattt
ggctctgctggggagacggtggtggttgaggagctactcgagggagaagaagtgtcttgt
ttgtgttttactgatgggaccaccattgcagccatgccccctgctcaggaccataaacgc
cttttggacggggacagaggacccaacactggaggcatgggggcttactgtcccacacca
caggtctctgaggtgacactgaagcagatcagagagaccgtattgcaaaagactgtggat
ggcatgagggaggaggggaccccatatgtgggtgtgctctatgcagggctgatgctcacc
ccacagggacccaaagtgctggagttcaactgccgcttcggagatcccgagtgtcaggtc
ttgatgccactgttgaagagtgacctttatgaggtcctaagggacaccctacaggggaaa
ctggcctctagctcccccgtgtggcatgagaatgtcgctgcagtgaccgtggtcatggcg
agtcctggttatcctggagcttacaagaagggcatagagctcacaggtctgtctcaggta
caggacatgggcctgcaggtcttccatgctgggacggctctgaaggaaggaggggttgtg
gtcaccagtggtgggcgtgtcctgacggttaccgcggtgatgcccagcctggacggcgcc
ctccacaaagccaatcagggagtggcatctgtggggttccccgacgcggcctaccggcga
gacattggccaccgcgccattacctaccttacacgctctagaggtctgacctataaggac
agcggagttgatatcgcagcaggcaatcggctagtggacttgatcaaacctctggccaaa
gccaccactcgggcagggtgcaacgctgagctggggggctttgcagggctctttgacctg
aaggctgctggattcagtgatcctgtcctggtgtctggaacggatggcgtgggaaccaag
ctgaagattgctcaagcatgtggacagcacggcactctgggacaggacctggtggcgatg
tgcgtgaacgacgtcttggcccagggcgctgagcccctcttcttcctggactacttctcc
tgcgggcagctggacgtgggagtggcctccacggtgattggtgggattgctgacgcatgc
aagatggctggctgcgctttgctgggcggtgaaactgcggagatgcctggcatgtatgcg
aagggcgagtatgacctggctgggttctgtgttggggccgtggagcggagctccgtgctc
ccgcggctgggggacatctccgagggtgacctcctgattggggtggcctcctctggggtc
cacagcaacggcttcagcctggtccgcaaggtcctggagcagtcggggctgcagtacagc
tcacctgccccttttggcaaagctggagaaactatgggcacggtcctgttgacgcccacc
aagatctacagccgcttgctgctgccaatcctgcgcagcggagcggtgaaggcctacgcc
cacatcactggaggaggcctgctggagaacatcccacgtgtgctgcccaaggagctggcc
gtagacctggacgcaacccgctggcatatcccgcctgtgttctcatggctgcaggacgct
ggaggcctcagcgaggaggagatgggccgcacctttaacctgggcctgggggccgtgctg
gtggtggcccgccccgacgcccagagggttctcaggcagctgcaggcccacgagcaggcc
tggatcgtgggctcgctcgctcacaagcagcccggttccgagccagtggtcatccggaac
ctgtcggcgagtctgagggcgggccctgaggcgaatccagacacgagcgctctgcccaat
ggcgccgcccactctgaccacacccagcgcaggcgcaccagagtaggcgtgctcatctct
ggaacaggcacaaacctgcaggccctgatggagcaggtcaagaagccatcgagtgcagcg
gagattgtggtggtcatctccaatcggcctggagtactcggcctgaagagggcctccatg
gcaggcatccagacacgggttgttgatcacaagctgtacggcagtcgctctgagtttgac
agcaccatcgaccgcgtcctggaggagtttggcgtggaggtggtctgtctggccggcttc
atgaggatcctcacagggacatttgtcaaaaagtggaacgggaagctgttgaacattcac
ccgtctctgctgccatccttcaaaggggttaacgcacaaaaacaggccctgcaggcgggt
gtacgggtcgcgggttgcaccgtccactttgtcgctgaggaggtagatgcaggagccata
attgttcaagaggcggtgccggtgttgatgaatgatactgaagatagcctatcagagcgc
attcgtgaggcggaacaccaggctttccctgcagcccttgagctggtagcgggtggggca
gtgaggttggcggaggacgggcgcatcatctggaattcgatgatgcaggtgtaa
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