Alosa sapidissima (American shad): 121697441
Help
Entry
121697441 CDS
T11137
Symbol
adamts1
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 1
KO
K08617
a disintegrin and metalloproteinase with thrombospondin motifs 1 [EC:3.4.24.-]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121697441 (adamts1)
Peptidases and inhibitors [BR:
asad01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121697441 (adamts1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADAMTS_spacer1
TSP1_ADAMTS
ADAMTS_CR_2
Reprolysin
TSP_1
Reprolysin_5
Adt-1
Reprolysin_3
TSP1_spondin
Pep_M12B_propep
ADAMTS_CR_3
Reprolysin_2
TSP1_CCN
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
121697441
NCBI-ProteinID:
XP_041934903
LinkDB
All DBs
Position
22:12690587..12696978
Genome browser
AA seq
938 aa
AA seq
DB search
MMGFAPLAISLLCTICVSAGRNAFEESTVVPVRLDPDLSRTLNVEAQEKESEKRIYRLDV
FGEQMVLELEPDHTFLAPGFVFHVVGNPGSTPQPESDSGAEARCFFSGTVNGDANSAAAL
NLCGGLQGGFYLNGQEYFIRPLNGSGVTEPTDEDLHVIQRRSRGFMAEEGSSKCGVNEEE
ERVKESPEKHTMNLDSNSDSKAHHRSRRFVSTPRYVEIMLVADQSMAEFHGAGLKPYLMT
IMAVASRLYRHPTIHNSITLAVVKLLVVYDEQHGPDVSSNAALTLRNFCQWQRQHNPASD
HNPEHYDTAVLFTRQDLCGAHSCDTLGMADVGTVCDPDRSCSIIEDDGLQAAFTVAHELG
HVFNMPHDDAKQCASVNGDHWSSHMMASTLSNLDQLRPWSPCSALMITSFLDNGHGQCLL
DKPQKPQQLPQALPGTLYDADRQCRLTFGEESQHCPDLSTTCAALWCTVTTANGLLVCQT
KNFPWADGTPCGRDSYCLAGQCLSTSEAARHQTPVNGGWGTWGPWGECSRTCGGGVQYSF
RDCDSPIPKNGGKYCEGKRIQYRSCNTETCPDSNGLSFREEQCLAHNDISSQVSFGSSGG
VEWVPKYAGVSPKDRCKLVCRAKGTGYFFILKPKVADGTPCTPDSTSVCVQGQCVKAGCD
RIIGSNKRFDKCGVCGGDGSTCKKVSGSLDRARPGYQDVVTIPAGATLVDVKQRSPGSRG
SDNSYLAVKRQDGTYLLNGDYKLTTLETDISLRGLLLRYSGSYAPLERLRSFAPLPEPLT
IQVLSVGESPRPRVKYSYFTPRPASAGPSSGGSQNRPSINAIREVGGAEWTLREWGPCSQ
TCGSGTQQREVLCLDTHGRQSRDCPEELRPAATRSCSTQPCPSWLLGEWSNCSKTCGRGF
RKRMLRCVGHDGRTLPNESCNAKDRPRPLLDLCNQSAC
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgatggggtttgcgcctttggcgatctctttgctgtgtactatttgcgttagcgccggg
cgcaacgcgtttgaggagagtacggtggtgccggttcggctcgacccggatctaagtcgg
acccttaacgtcgaggcgcaagagaaggagtcagaaaaacgcatctatcgtttggacgtg
tttggcgagcagatggtcttggagctagagccggaccacacattcctggcgcccgggttt
gtcttccatgtggtgggtaatcctggttcgaccccgcaaccggagtctgacagtggagcg
gaggcacggtgctttttctcaggaacggtcaatggcgatgccaactccgccgctgcgctt
aatctgtgcggaggacttcaaggcggcttctacctgaatggccaagagtacttcatccgg
ccactcaatggcagcggagtcaccgagcccacagatgaggatcttcacgttatccagcgc
cggagcagggggttcatggccgaggagggcagctctaaatgtggcgttaacgaggaggag
gaacgggtcaaggagagcccagagaagcataccatgaatctggactcaaactctgattca
aaagcgcaccatcgttcccggcgcttcgtgtccacccctcgctatgtcgaaatcatgctg
gtggctgaccagtccatggcggagttccatggcgcgggcctgaagccatacctcatgacc
atcatggcggtggcatcgcgcctctatcgccaccccaccatccacaactccatcactctg
gccgtggtgaagcttctcgtggtgtacgacgagcagcacggaccagacgtctcatccaat
gccgcgctgacgctcaggaacttctgccagtggcaacggcagcacaacccggccagtgac
cacaaccctgagcattacgacacagcggtgctgttcaccagacaggatttgtgtggcgcc
cactcctgtgacactctaggtatggcagatgtgggcactgtgtgtgacccggatagaagt
tgctccattattgaggatgatggactacaggcagccttcactgtggcacacgaacttggt
catgttttcaacatgccccatgatgatgccaaacagtgtgccagtgtcaacggtgaccac
tggagctctcacatgatggcgtccaccctctccaacctggaccagctgcggccctggtcc
ccgtgcagtgccctgatgatcacctcctttctggacaatggccatggccagtgcctcctg
gacaagccccagaagccccagcagctgccccaggccctgccaggcaccctgtacgatgca
gatcgccagtgccgcctgacgttcggcgaagagtcccagcactgtcccgacctgagcacc
acatgcgccgcactgtggtgcacggtcaccactgccaatggcctgctggtgtgccagaca
aagaacttcccgtgggccgacggcacgccctgcggacgtgacagctactgcctggccggc
cagtgtctcagcacgagtgaagcagccagacaccagactccagtcaatggtggttggggt
acttggggcccgtggggcgagtgttcgcgtacttgtggaggtggcgtgcagtattccttc
cgcgactgcgacagccccatacccaaaaatggaggcaaatactgtgaaggcaaaaggatc
cagtatcgttcttgcaacactgagacctgccctgatagcaatggtttgtcattccgcgaa
gagcagtgtctggcccacaatgatatctcctcccaggtgtcattcggatcaagtggggga
gttgagtgggtgccgaaatatgccggagtgtcacccaaagaccgctgtaagctggtgtgc
cgggctaagggaacaggctacttcttcatcctgaaacctaaggtggctgatggcactccc
tgcaccccagactcgacatcagtgtgcgtgcaaggccagtgtgtcaaggcaggctgcgat
cgcatcatcggctctaacaagcgctttgataagtgcggtgtctgtggtggtgatgggtcc
acatgcaagaaggtgtctggttctctggatcgtgcaaggcctggttatcaggatgtcgtg
actatccctgctggtgctactctggtggatgtcaaacaacgtagccctggcagccgtggt
agtgacaacagctacctggcagtcaagcgtcaggacggcacttaccttctgaatggtgac
tacaaactgacgacgctcgagacagacatctccctgcgggggttgctgctacgctacagc
ggctcatacgcccccctggagcgtctacggagcttcgctccactgcccgagcccctgacc
atccaggtgctgtccgtgggtgagtcgccaagaccgcgggtcaagtacagctacttcacc
ccgcgtcccgcttccgctgggccttcctcaggaggctcccagaaccggccgtccatcaac
gccatccgggaggttggcggggccgagtggaccctgcgtgagtgggggccctgctcgcag
acctgcggcagcggcacgcagcagcgtgaggtgctatgtctggacacccacgggcgccag
tcgcgcgactgcccagaggaactccggccggccgccacccgctcctgctccacccagccc
tgcccctcctggctgctgggcgagtggtccaactgctccaagacgtgcggcaggggcttc
cgcaagcgcatgctgcgctgtgtggggcacgacggccggacactgcccaacgagagctgc
aatgccaaagacaggccgcggcccctgcttgacctgtgcaaccagagcgcctgctag
DBGET
integrated database retrieval system
