Alosa sapidissima (American shad): 121697462
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Entry
121697462 CDS
T11137
Symbol
socs5a
Name
(RefSeq) suppressor of cytokine signaling 5a
KO
K04698
suppressor of cytokine signaling 5
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121697462 (socs5a)
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121697462 (socs5a)
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Gene cluster
GFIT
Motif
Pfam:
SH2
SOCS
SOCS_box
Motif
Other DBs
NCBI-GeneID:
121697462
NCBI-ProteinID:
XP_041934918
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Position
22:27019954..27037214
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AA seq
541 aa
AA seq
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MERVGKVWSNLKRGCQSLLHPDGGARDQALPQEASPPRPPASSLSLVAGRASNNNTSSVG
GSSGSASMRRPGQNCVVDMAQVLEITLEQDVDSRPGQLGTRRDSYSRHAPWSGKKRHSCS
TRAQGSLEGRERGGRGRCRHRGQELESGVGGTRSLRQQLQDTVGLCLPLRCSASRAPPKR
KIHLTELMLETCPFPPGSDLARKWHLIKQHTAPVAAGSGSSSSSSSAPAALPPSASGQQD
WPRGGGGGGAAASAEDEEERLRERRRLSIEEGVDPPPDAQIHTVEALAPLACLHKLGPKL
APGLTEGLGEASGGARGGRGGSAPDCDSEEEDGTTLCLQTRRARQRHAHPPPSSAAAAEG
PWKVHTQIDYIHCLVPDLQQITALPCYWGVMDRYQAEALLDGRPEGSFLLRDSAQEDYLF
SVSFRRYGRSLHARIEQWNHNFSFDAHDPCVFHAATVTALLEHYKDPSACMFFEPLLTAP
MPRSFPFSLQGLARSAICGRVSYDGIAALLMLPPPLQDYLREYHYKQRVRVRWLERELKA
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggagagggtgggtaaggtgtggagcaacctaaagaggggatgccagtctctgctccac
ccagatggaggtgctcgtgaccaggctctgccacaggaggccagcccccccaggccacct
gcctccagcctgtccctggtggctgggagggccagcaacaacaacactagcagtgtcggt
ggctcgtcgggaagtgcgagcatgcggcggcctgggcagaactgcgtggtggacatggcc
caggtgctggagatcacactggagcaggatgtggacagccggccgggccagctgggcacc
cggcgggactcgtactcgcgccacgcgccctggagcggcaagaagcgccactcgtgctcc
acgcgggcgcagggctcgctggagggtcgcgagcggggaggcaggggccgctgccgccac
cggggccaggagctggagtccggtgtcggggggacgcggtcactgcggcagcagctgcag
gacacagtggggctgtgcttgccgctgcgctgctcagcctcgcgcgcgccgcccaagcgc
aagatccacctgaccgagctcatgctggagacctgccccttcccccccggctcggacttg
gcgcgcaagtggcacctcatcaagcagcacacggctcccgtggccgccggctcgggttca
tcctcgtcttcgtcgtccgccccggccgctctaccgccctctgcgtctggccagcaggac
tggccgcgaggaggaggaggaggaggggcggcagcgtcggccgaggacgaggaggagcgc
ttgcgtgagcggaggcggcttagcatcgaggagggcgtggacccaccgcccgacgcccag
atccacacggtggaggccctggccccactggcctgcctgcacaagctgggacccaagctg
gccccagggctgaccgagggcctgggcgaggccagtggcggggcgcgcgggggacgagga
ggaagcgccccagactgcgactcggaggaggaggacggcactacgctgtgcctgcagacc
cggcgcgctcgtcagcgccacgcccacccgccaccttcgtcagccgccgccgccgagggc
ccctggaaggtccacacgcagatcgactacatccactgcctggtgcccgacctgcagcag
atcacggcgctgccctgctactggggcgtgatggaccgctaccaggctgaggcactgctg
gacggccggcccgagggtagcttcctgctgcgcgactcggcccaggaggactacctgttc
tcggtcagcttccgccgctacggccgctcgctgcacgcgcgcattgagcagtggaaccac
aacttcagcttcgacgcgcatgacccgtgcgtcttccacgccgccaccgtcaccgcgctg
ctcgagcactacaaggacccgtcggcgtgcatgttcttcgagccgctgctcacggcgccc
atgccgcgctccttccccttctcgctgcagggcctggcgcgctccgccatctgcggccgc
gtctcctacgacggcatcgccgcgctgctgatgctgccgccgccgctgcaggactacctc
agggagtaccactacaagcagcgcgtgcgcgtccgctggctggagagggagctcaaggcc
aagtga
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