Alosa sapidissima (American shad): 121697506
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Entry
121697506 CDS
T11137
Symbol
ldb3b
Name
(RefSeq) LIM domain-binding protein 3b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121697506 (ldb3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121697506 (ldb3b)
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121697506 (ldb3b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
121697506
NCBI-ProteinID:
XP_041934978
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Position
22:complement(26786204..26804529)
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AA seq
296 aa
AA seq
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MSGYTVTLSGPAPWGFRLQGGKDFNMPLTISRISPGSKAATGNLAQGDVIASIDGVSTEG
MSHLEAQNKIKQATHKLVLTMQRSRRPAPVPTATPRMDSPMPVIPHQKIIANTAGNSSNQ
EYVPSFNPSVLKDSALSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQA
KGHEGASEEPEPGAAFATLPMKDPLVDSASPVYQACIKPEDRESEMSEWARRAANLQSKS
FRILAHLTGTEYMQDPDEEALRKSREKFESEVKGPRFAKLKNWHQGLSSQILNVTE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctacactgtcaccctcagtggccctgcgccctggggcttcagactgcagggg
ggcaaagacttcaacatgcccctgaccatctccaggatctcaccaggcagcaaggcagca
acaggcaacctggcccagggtgatgtcatcgcttccatcgatggtgtcagcacagagggc
atgagccacctggaggcccagaacaagatcaagcaagctacccacaaactcgttctcacc
atgcagaggtcgagacgtcccgcccctgttccaacagccacccccagaatggactcacca
atgccagttatcccacaccagaagatcatcgccaacacagcaggaaattcatcaaatcaa
gagtatgtccccagcttcaaccccagcgtgctgaaggactccgccctgtccacccacaag
cccattgaggtgaaagggcccggtggcaaggccaccatcatccacgcgcagtacaacact
cccattagtatgtactcacaggacgccatcatggacgctatcgctggccaggcgcaggcc
aagggccacgagggagcgagtgaggagccagaacccggagcggcctttgccactctccct
atgaaagaccctctggtagacagtgcttcccctgtataccaggcctgtattaagccagag
gacagggagtccgagatgtccgagtgggctcgccgtgcagccaacctacagtccaagtcc
ttccgcatccttgcccatcttacagggaccgaatacatgcaagacccagatgaggaagct
ctgaggaaatcgagggagaagttcgagtctgaggtgaaaggcccacgatttgctaaactg
aagaactggcaccagggcctgtcctcacagatcctcaatgtcacggagtga
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