Alosa sapidissima (American shad): 121697522
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Entry
121697522 CDS
T11137
Symbol
ddx24
Name
(RefSeq) ATP-dependent RNA helicase DDX24
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asad03009
]
121697522 (ddx24)
Enzymes [BR:
asad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121697522 (ddx24)
Ribosome biogenesis [BR:
asad03009
]
Eukaryotic type
Pre-60S particles
Helicases
121697522 (ddx24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DsrH
AAA_22
Motif
Other DBs
NCBI-GeneID:
121697522
NCBI-ProteinID:
XP_041934998
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All DBs
Position
22:complement(5699677..5713360)
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AA seq
983 aa
AA seq
DB search
MKPKKPLPKGRRLSSHKRGILIKGKWKAVQLDPSLFANEDMGGLVCFEELTDYSLVDSDR
ALIAAEEKPEKTAKNKNKKRKASELEAEEEEKLADEEGELEEEEAAAVALGEDEDAEQED
GGPEGDDAEVTEKPAKKKRKKQKKKKKKKESQPANEADTTATEATGAAEETGQKMSADQT
MGDRQETTIKSQDDETKDSVKSKKKDKKKKEKKKPDATKQTAACQEELASSAPGSQPKKK
KEKKKKKKPDITKQTAASQEELASSAPGSQPKQKKKEKKNWTAMGGASEASDVSAWKDLF
VPEPVLQALSKLGFSAPTPIQALALPPAIRDHMDILGAAETGSGKTLSFGIPVIHNILEW
KRASENWKMTRLSDMSDTMPQEEGAVSPPASNAADVADITTTTIAEEEASERTTKQEEPA
EGTVVTPSVVVTEADAENEDDAIEGEEDDGEENDVSQDDDDEEEEEEEGGLEVHEDEWCD
LDDDDGGGEGDEVDQIQIMTTQTDLEKPDEAGDKQPLLALILTPTRELAVQVKHHIDAVA
QFTGIKTAIIVGGMAPQKQHRMLSRKPEIVIATPGRLWDLIREGHPHLKNLRYLRSLVID
EADRMVERGHFAELDNLLEMLSTSQFNPKRQTFVFSATLTMVHSLPMRVQQKKGRKVQPT
SKLDLLMQKVGIKDKPKVIDLTRKEATVETLTETRIHCEKEEKDLYLYYFLSQYPGRTMV
FANSIDCIKRLNSLLVILDQTPLPLHANMHQKQRLKNLERFAERDNCVLLTTDVAARGLD
IPNVQHVIHYQVPRTSETYVHRSGRTARATKQGLSLLLIGPDDLMNYKKIYRTLGKDEDL
PMFPVQTKCMAAIKERVKLAWQIEKIEYHSGKQKQHNSWFKQAAEAMEIDLDDDLLMAAG
RDKEEDLQQQKMVKGMKKHLKHLLSQPVFRNDMKTKYPTQMGRLQLPELPLASLETAITS
VARNKDKKSQWRNNKKQKKKLES
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaagaagcccttgcccaaaggcagacgcctgagctcccacaaaagagggata
ctcatcaagggcaagtggaaggccgtgcagctggacccaagccttttcgccaacgaggac
atggggggcctggtctgctttgaggagctgaccgactactcgctggtcgattcagaccga
gccctcatcgcagcagaggagaaaccagagaaaacggctaagaataagaataagaagcga
aaggcgagtgaactggaagctgaggaggaggagaaattggcggacgaggaaggagagctg
gaggaggaggaggcggcagcggtggctttgggggaggatgaagatgctgagcaggaagac
ggagggccagaaggagacgatgcagaagtgacagagaaaccagccaagaagaagagaaag
aagcagaagaagaagaagaagaagaaggagagtcagcctgcaaatgaagcggacactaca
gccactgaggccacaggtgctgctgaagagacggggcagaagatgtctgctgaccagacc
atgggagacaggcaggagaccacaatcaagagccaggatgacgaaaccaaagattctgtg
aagtccaaaaaaaaagacaagaaaaagaaggagaagaagaagccagacgccaccaaacag
actgcagcctgccaagaggagctggcgtcctcggcaccaggctctcagcccaagaagaag
aaggagaagaagaagaagaagaagccggacatcaccaaacagactgcagcctcccaagag
gagctggcgtcctcggcgccaggctctcagcccaagcagaagaagaaggagaagaagaac
tggaccgcgatgggtggtgcctcggaggcgtcggacgtgtcggcgtggaaggacctgttt
gtgcccgagcctgtactgcaggcgctgagcaagctgggcttctcggcccctacgcccatc
caggccctggcactgccaccggctatccgggaccacatggacatcctgggcgccgcggag
acaggcagtggaaagactctttcctttggaattcctgtgatccataatatcttggagtgg
aaacgtgcctctgagaattggaagatgactagactgtcagacatgtcagacaccatgcca
caggaagagggtgctgtttctcctccagccagtaatgccgctgatgttgctgacattact
actaccactattgcagaagaagaggcgtctgagagaaccaccaaacaagaggaaccagca
gagggcactgtagtgacgccgtctgtggttgtgactgaagcagatgccgagaacgaagat
gatgccatagaaggagaggaagatgatggggaggaaaacgatgtgtcgcaggatgatgat
gatgaggaggaggaggaagaggagggtgggctggaggttcatgaagatgaatggtgtgat
ttggatgatgatgatggtggtggtgagggggatgaagttgaccaaatccaaatcatgacc
actcagactgacttggagaaacctgatgaggccggtgacaagcagccactgttggcgctc
attctcaccccaaccagagagctagctgtgcaggtgaaacaccacatagatgctgtcgct
cagttcacaggcataaagacggcgatcatcgttggcgggatggctccacagaaacagcac
aggatgctgagtcggaagccagagatcgtcatagcaactcctggccgtctctgggacctt
atcagagagggacacccccatcttaaaaacctcagatatctccggtcactggtcatcgat
gaggcggaccgaatggtggagcgtggccacttcgccgagctggataaccttctagaaatg
ctcagcacgtcccagttcaaccccaagcggcagacgttcgtcttctcggccactctgacc
atggtacacagcctgcccatgcgggtccagcagaagaaaggtcgcaaggtccagcccacc
agcaagctggacctcctcatgcagaaggtcggcatcaaggacaagcccaaggtcatcgac
ctgactcgtaaggaggcgacagtggagacactcacggagactcgcatccactgcgagaag
gaggagaaggacttgtatctctactatttcctgtcgcagtacccaggccgcaccatggtg
ttcgctaacagcatcgactgtataaagcggctcaactcgctgctggtcatcctggaccag
acgccgctgccgctgcacgctaacatgcaccagaagcagcgactcaagaacctggagagg
ttcgccgagagagacaactgtgtccttctcacaacggacgttgctgctagaggacttgat
attccgaatgtccagcatgttattcactaccaggttccgcgtacatcagagacgtacgtc
caccgcagtggtcggacggcccgtgccactaagcagggtctgagcttgctgctgattggt
ccagacgacctgatgaactataaaaagatctaccggaccttggggaaggacgaggacctc
cccatgttccctgtccagaccaaatgcatggctgccatcaaggagcgtgtgaaactagcc
tggcaaatagagaagattgagtatcacagcggcaaacagaaacagcacaactcctggttc
aaacaggcagcagaggccatggagatcgacctggatgacgacctgctcatggctgcgggc
cgtgataaggaggaagacctgcagcagcagaagatggtgaagggcatgaagaagcacctg
aagcacctcctgtcccagccggtcttcaggaacgacatgaagaccaagtaccccacgcag
atgggccggctgcagctacccgagctgcccctggccagcttagagacggccatcaccagc
gtggccagaaacaaggacaagaagagccagtggaggaacaacaagaagcagaagaaaaaa
ttagagagttag
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