KEGG   Alosa sapidissima (American shad): 121697576
Entry
121697576         CDS       T11137                                 
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
  KO
K05636  laminin, beta 1
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04510  Focal adhesion
asad04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:asad00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121697576 (lamb1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121697576 (lamb1b)
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMININ_IV_B EGF_LMN_ATRN F5_F8_type_C
Other DBs
NCBI-GeneID: 121697576
NCBI-ProteinID: XP_041935074
LinkDB
Position
22:5308178..5339099
AA seq 1760 aa
MLILLIATCMAFGSHAQMDVPEFGDVCAQGSCYPATGDLLIGRAHRLTASSTCGLQQPER
YCIVSHLQEEQNCFVCDSRQPGHPNSHTIRTVVTTFTPNRLVTWWQSEHGVENVTIQLDL
EAEFHFTHLIMTFKTFRPAAMVIERSMDNGKNWQVYRYYAHDCKRTFPDIPEGPIKKVDD
IICDSRYSEVEPSTQGEVIFRVLDPAFEIPDPYSVQIQNLLKITNIRVRMLKLHTLGDNL
LDIREEVRHKYYYALYEMVVRGNCFCYGHASKCAPSGQNEGDAEGMVHGHCMCNHYTTGL
NCEKCQDFYHDHPWKPALGLNTNACKRCECNHHAYACHFDMAAYLATGNISGGVCDECQH
NTMGRQCELCKPFYYQHPERHIRDPNICEPCSCDPRGSLNGGLCDGTTDVLASLIAGQCR
CKQNVEGERCDQCRPGHFGLSETPEGCQQCTCNPLGTVPGSNPCDTNSGSCFCKRLVMGQ
NCDQCQPQHWGLSNNMDGCRPCDCDQGGAVNNDCNPVTGQCVCREHMFGRRCDEIESGYY
FISMDHYTYEAEEAKFGPAVSVIQRPYPVDREPTWTGVGLARVPEGEELQFTINNLPETM
DYDLLIRYEPQLPAEWERVAVRVDRPVLEGPRCADTTTDQQAVSLPPGSRHVPLPEPICF
EEGQNFTVHLSLPFYSSQSDHQNPFIFIDSIVLMPHARSLDMFSSDVDWDTFERYKCQER
SQSVVKTQMTHICRDYIFSMSALLHQGAMKCVCDPHGSRSTVCEPNGGQCQCRTNVMGRS
CDRCVPSHFLYPNCRPCECDPQGSVTQFCADATGQCECVPGAYGRQCAHCLPSHWGFPHC
QPCHCNGHSQFCDPHTGECQGCRGNTAGHNCERCDDGFYGNALLEVGAQCRPCMCPDGPG
SRRQFAVGCYEDLYTQRVTCACSPGYTGPRCEQCAPGYYGNPEVPDGQCLPCECNGNIDL
MDPGSCDAHTGVCLKCLHYTEGSGCQYCKRGYYGDAKTQDCRKCMCNERGTSSQGCTAGE
CVCDEYSGQCPCLPSVVGQHCDQCAIDTWNYDSGEGCQACLCHPVHSYGSSCDQLTGQCS
CQPGFGGRTCEECRELFWGNPEVQCHGCDCDPRGISSEQCNKRTGDCVCVDGYAGRRCDS
CARGYSGQFPDCVRCHQCFSDWDVTVGELTNHTQRLLQTVEDARVGGVVAPYKDLIDSIE
QSVTELRAILEHDPVSKPLEDTQKRLQEATDLVAYLFRSLNVTELTLEVVSEEHNRTGSQ
LEELEMEAAKLHQTVRDVQDQVERVKNSNIRGASDSITKYYHQSIEAELRAHGATSSPSS
TVQESAVVRQTTEDMMNRTKAEFDLKQEQQTKQLEELANEIETLDLSTLSITACGAGSED
GSCGACGGLGCVTEDGAPHCGGEGCGDVNSVVQEGVNAAKNFDKEILKALQEVDKLNRMV
SEARGRADVARLNAQDVLLKANQSKERVELNNQELRSLIQQIRDFLRNSTDLETIEALSN
EVLAMSMPASAAQLEELTNEIRERVKSLTGVEEILDRSHGDVTQARMLLQDAKTASDDAT
EMKNTADMLNKWLNQTEHTQITTQDGIKEASADIKTTQDLQATLDSETASAELKLNNGMQ
SLVGMERDLSLIKAKTQEIVSTAQHTQRNTEYISQDVAQTKQELDSEVMKRYSTMESVMQ
QKAGNVIEGRQKAKELQEEAKRMLDHAMASLQKLRELERSYVVNQQTLEEKAQILAGLEK
AAKDVLQEISHKVTVYSICL
NT seq 5283 nt   +upstreamnt  +downstreamnt
atgctgatcctgcttattgcaacgtgtatggcctttgggtctcacgcccagatggatgtc
ccagagtttggtgacgtgtgtgctcagggcagctgctaccccgccaccggagacctgttg
attggtcgagcccaccggctgacggcctcctccacatgtggactccagcagccagaacgc
tactgcattgtcagccacttgcaggaggagcagaactgttttgtgtgtgactccagacag
cctggccatcctaacagccacaccatcaggaccgtggtcaccactttcactcccaaccgc
ctcgtcacatggtggcaatcagagcacggcgttgagaatgtgaccattcaattggaccta
gaggccgagttccatttcacacatctcatcatgaccttcaagacattccgtcctgctgct
atggtgattgagcgttccatggacaatgggaagaactggcaggtgtaccgttactatgcc
cacgactgtaagaggaccttcccagatatacctgaggggccaatcaaaaaggtcgatgac
atcatctgtgattcacggtactcggaggtagagccgtccactcaaggagaggtgatcttc
agagttctggacccagcctttgaaatccctgatccctacagcgttcagattcaaaacctc
ctgaagataactaatattcgcgttcgcatgctgaagcttcacacccttggtgataacctt
ttggatatcagagaggaggtccgacacaagtactactacgcactgtacgagatggtcgtc
cgtggcaactgcttctgctatggccacgcctccaagtgcgccccatcgggtcagaatgag
ggggacgctgagggcatggtccatggtcactgcatgtgtaaccattatactaccggtctg
aactgtgagaagtgtcaggacttctaccatgaccatccatggaaacctgctctgggtcta
aacacaaatgcatgcaagaggtgtgagtgtaaccatcatgcatacgcgtgccactttgac
atggcggcgtacctggccaccggcaacatcagtgggggggtgtgcgacgagtgtcagcac
aacaccatgggccgtcagtgtgagctctgcaagcccttctactaccagcaccccgagcgc
cacatcagagaccccaacatctgtgaaccgtgcagctgcgaccctcgtggctctctgaac
gggggtctgtgcgatggaacgacggacgtgctcgccagtctgatcgctggtcaatgccgc
tgcaagcagaacgtggagggagagaggtgcgatcagtgtcgccctggacacttcggcctg
agcgaaacaccagagggctgccaacaatgcacctgtaacccactgggtacggttcctgga
tcaaacccatgtgacaccaactctggaagctgcttctgcaaacggctcgtcatgggccag
aactgcgatcagtgtcagcctcaacactggggacttagcaataacatggacggctgcaga
ccatgtgactgtgaccaaggcggggccgtcaataacgactgtaatccggtgacagggcag
tgtgtgtgccgggagcacatgtttggccgtcgctgtgatgagattgagtctggctactac
tttatctctatggaccactacacctatgaagcagaagaggccaaatttgggccggctgtg
agtgtgatccagaggccgtaccctgtggatcgtgagcccacctggacaggtgtggggttg
gccagggttccagagggggaggagctacagttcaccatcaacaacctcccagagaccatg
gactatgacctgctcatacgctatgagccacagttaccagcggagtgggagagggtggcg
gtgagggtggaccggccggtgctggagggaccgcgctgtgcagacaccactactgaccag
caggctgtctcactgcccccagggtccaggcatgtgcctctgccggagcccatctgtttt
gaggagggccagaacttcactgttcacctaagtctgcccttctactcctcccagagtgac
caccagaacccattcatcttcattgactcaattgtgctgatgccgcatgcacgctcgctg
gacatgttctcgtcagacgtggactgggacacgttcgagcggtacaaatgtcaggagcgc
agccagagcgtcgtcaagacgcagatgactcacatctgcagagactacatcttcagcatg
tctgctctgctgcaccagggagccatgaagtgtgtgtgtgatccccatggctcccgtagc
actgtgtgtgagccaaatggggggcagtgtcagtgccgaaccaacgtcatggggcggagc
tgcgacagatgtgtcccctcccacttcctgtatcccaactgcaggccctgtgagtgtgac
ccccagggctcggtgactcagttctgtgcggacgccactggtcagtgtgagtgtgttccg
ggggcgtatggacgccaatgtgcccactgtctgcccagccactggggcttcccccactgc
caaccgtgccactgcaacgggcactcgcagttctgtgacccgcacacgggtgaatgccag
gggtgccgcggcaacacagcagggcacaactgtgagaggtgtgacgatggtttctatggc
aacgcgctgctggaggtgggggcccagtgtcggccctgcatgtgtccagacgggccaggc
agcaggaggcagtttgctgtgggctgctacgaggacctgtacacacaacgcgtcacgtgt
gcatgcagtccagggtacacaggtccacgttgtgagcagtgtgccccgggttactatggc
aacccagaggtccccgacgggcagtgcctgccatgtgagtgtaacggtaacatcgacctg
atggacccggggtcctgcgacgcacacacgggcgtctgcctcaagtgcctgcactacacc
gagggcagcggctgccagtactgcaagaggggttactatggcgacgccaagacgcaggac
tgcaggaagtgtatgtgtaacgagcggggcaccagtagccagggctgcacggcgggcgag
tgtgtgtgtgacgagtacagcgggcagtgcccgtgtttgcccagtgtggtgggtcagcat
tgtgaccagtgtgccattgacacctggaactacgacagtggagagggctgccaagcctgc
ctgtgccaccccgtacactcatatggctcctcatgtgaccagctgacaggccagtgtagt
tgtcaaccgggttttggaggtcgaacttgcgaagaatgcagagaattgttttggggcaac
cctgaggtccagtgtcatggctgtgactgcgacccccgtggcatctccagtgagcagtgt
aacaagcgcacgggagactgtgtgtgtgtggacggctacgccggccggcgctgcgactcc
tgcgctcgcggctactccggtcagttccccgactgcgtgcgctgccaccagtgcttcagc
gattgggacgtcaccgtcggcgagctgaccaatcacacgcagcgcctgctccagactgtt
gaggatgctcgcgtgggcggggtcgtcgcaccgtataaggatttgattgacagcatagag
cagagtgtgacggagctgagggcgattctggaacatgaccccgtgtccaagccactggag
gacactcagaaacggctgcaggaggccacggacctggtagcgtatctgttccgctccctg
aacgtgacagagctgactctggaggttgtgtctgaggagcacaacaggaccggctctcag
ctggaggagctggagatggaggcggccaaactgcaccagaccgtcagggacgtgcaggac
caggtggagcgagtgaagaactccaatatcagaggagcctctgacagcatcactaaatac
taccatcagtccattgaagctgagctacgtgcccacggcgccacctctagtccatccagc
acagtgcaggagtccgccgttgtacggcaaaccacagaggacatgatgaaccgcaccaag
gccgagtttgacctgaagcaggagcagcagaccaaacagctggaggagctggccaatgag
atcgaaaccctggacctatcaacacttagcatcacggcatgtggtgcaggctcagaggac
ggcagctgtggtgcgtgcggcggtctcgggtgcgtgacggaggacggagcgccccactgt
ggcggggaggggtgtggcgacgtcaactcagtcgtgcaggagggcgtgaacgccgccaag
aactttgacaaggagatcttaaaggccctacaggaggtggacaagctcaacaggatggtg
tcagaggctcgtggtcgagctgacgttgctaggctgaatgctcaggacgttttgctgaaa
gccaatcagagtaaagagagggtggagcttaacaaccaagaactacgcagcctcatacaa
cagatacgggacttcctgagaaacagcacagacctggagactatcgaggcgctgtccaat
gaggtgctggcgatgagcatgccagcgtcggcagcccagttggaggaactgaccaatgag
atccgagagcgtgtcaagagcctgaccggcgtggaggagatcctcgaccgcagccacggc
gacgtcacacaagcacgcatgctgctgcaggacgccaaaaccgccagtgatgatgccact
gaaatgaagaacacagcggacatgttgaacaagtggttgaatcagacagagcacactcag
ataaccactcaagacggcatcaaagaggccagcgctgacatcaagacaacacaggacctg
caggctactctggattcagagactgcgtctgctgagttgaagttgaataacgggatgcag
agtctggtggggatggagagggatctttcgttgattaaagccaaaacgcaggagatagtc
agcacagcgcaacacacacagcgtaacactgaatacatctcacaggatgtggcacagacc
aaacaggagctggactcggaggtgatgaagaggtactccaccatggagagtgtgatgcag
cagaaagcaggcaatgtgatcgagggccgacaaaaagccaaggagcttcaggaggaggcc
aaacgcatgctggaccacgccatggcctccctgcagaaactcagagagctagagcggtca
tatgtggttaaccagcagactctagaggaaaaagcccagattctggcggggcttgaaaaa
gcagccaaggatgtgcttcaggagatcagtcacaaagtcaccgtctacagcatctgtttg
taa

DBGET integrated database retrieval system