Alosa sapidissima (American shad): 121697749
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Entry
121697749 CDS
T11137
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121697749 (caprin2)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121697749 (caprin2)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121697749
NCBI-ProteinID:
XP_041935340
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Position
22:27489676..27498833
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AA seq
978 aa
AA seq
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MLGIFARSPQRPRFHRHTERVRSVSETPNMVQLSASPDPDMFPSPSRHSGEVGDKHGSPK
SDSSPRSLTSLQLALSASTTAYPGYETYIEDGLICLKHKIRNIEKKKLKLEEYRRRLKNG
EKLNQDQLDAVKKYEEVVHNLAFAKELHKTLSSLTQDLLKAQKKAVKREQVARMEAERKR
LCTVLQMQYVLQNLQNEHVRKDVLNSASRPLLISAKELEGLRDLGALLNCKRDGHSSLED
QMMWGAVVYWELLEGKEKPVIGHTYKHMKEWLAKLIDCGYFDKVVAPKDQKESENHVRPG
GLAALVKFRTNEVPTRVFLNRHYIPDEGLSDGSLDKTSPSLNWKEDFLARKEQEPPDSWE
MEFNDVPPSSHPKTTALQKPSRGAAGFILKDQSSVKKPINEPKPKAQRRPKAGQDVKSAS
RTEARVEVFNSPSPLPKDPILRKQELEDLMGQISGSFSFMQESLLDGEAPQTHVHPRICC
PSPVPSPPLAQRESNDGPDDHSPKTMHSTPLPSKHLAKEGNTSLTNESKSLDNWDLDVHS
VEEVEEKPQLSSREGFESPPLFHRKSSIPITPEEKLPPETPVPQPEQQQQPPRDVVTPPA
TESVQAFSTPPNHQAHRITAPSAPYQTMHPVFKVSVPTPLSSGSYLKPDGTLLSGSNCVR
YATASTQTPPELNPPEAENLQPDELIQSECMVVSGGQMYTMGRSGQPYHVRGSVRGMGRA
GRGLAHYVRSPSGHRGGFDGYRTSPRSAGGFVPVSHSMRDMTSTPINARETGYHSNYKHG
GPGGQRTNSSAGWSDSSQVSSPDREGAYMVDLVDSGHGDSLSVDMPVTPQGTHTLMPLHV
YPISQQIRVAFSAARTFNFAPGTLDQPIAFDLLHSNVGEMFDMPSGRFTCPVSGTYVFIF
HILKLAVNVPLYINLMRNEEVVVSGYANDGAPDHETASNHAVLQLYQGDQLWLRLHRGAI
YGSSWKYSTFSGFLLYQD
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcattttcgctcggtcaccacaacgaccccgcttccaccgacatacagaacga
gtgagaagcgtaagtgagactcccaacatggtgcagttgagtgcgtccccagaccccgat
atgttcccctctccatctcgacactcaggggaggtgggagacaagcacggaagcccaaag
tctgactcctctccacgttccctcacctccctgcagcttgcactctctgcctccaccact
gcctatcccggctacgagacttacatagaggatggccttatctgtctcaagcacaagatt
cgtaacattgagaaaaagaagctaaaactggaggagtacaggaggcgcttaaagaatggt
gaaaaactcaatcaagaccaactggatgcagtgaagaagtatgaagaagtggtccataac
ctggcatttgcaaaagaactgcacaagacacttagttcattgacacaggacctgctgaag
gctcagaaaaaggcggtgaagcgtgagcaagtggcgaggatggaggctgagcgcaagcgt
ctgtgcaccgtgctgcagatgcaatacgtcctgcagaacctccaaaacgagcacgttagg
aaggacgtcctgaacagcgccagccgcccactgctcatctccgcaaaagagctggagggc
ctacgggaccttggtgccctgctgaactgcaagagggatggccacagcagtttggaagat
cagatgatgtggggagctgttgtctattgggagcttctggaggggaaggagaaaccagtt
attggtcacacatataagcacatgaaggagtggctggcaaagctgatcgattgtgggtac
tttgacaaagttgtggctcctaaagaccagaaggaatcagagaatcatgtgagaccagga
ggtcttgccgcccttgtgaagttcagaacaaatgaagtgcctaccagagtgtttcttaac
agacactatatacctgatgaaggcctcagcgatggtagtctggacaaaacctccccttca
cttaactggaaagaggacttcttggcccgcaaagagcaggagcctccagactcatgggaa
atggagttcaatgatgtgccaccttcctcacatcctaagactacagcactacaaaaacca
agcaggggagcagctggctttatccttaaagaccagagctctgtgaagaaacccatcaat
gaacctaaaccgaaagctcagagaagacctaaagctggacaggatgtaaaatcggcatct
cgaacagaggcccgagtggaggtgttcaactctccatctcctctgcccaaagatcccatc
ttacgaaaacaggagctggaagacttgatgggtcagatttcaggatccttcagctttatg
caggagtcattactggatggtgaagctcctcaaacacacgtgcatcctaggatttgttgt
ccttctccagtgccctcccctccacttgcccagagggaatccaatgatggtccagatgac
cactctcccaaaaccatgcattctaccccactgccttcaaaacatcttgccaaagagggt
aatactagtctgaccaatgagagtaagagtctggacaactgggacctggatgtccattca
gtggaagaggtagaggagaaaccgcagttgtctagtcgagagggctttgagtcgccccca
cttttccaccgcaagtctagtatcccgatcacaccggaagagaaactgccacctgagact
cctgtgccacagccagagcagcagcagcagcctccccgtgatgtggtgacccctccagcc
acagagtccgttcaagccttctccactccaccaaaccaccaagctcacagaatcacagcc
ccgtctgctccctaccagactatgcatcctgtgttcaaagtcagtgtgcctacgccatta
agcagtgggtcttacttgaagcctgatggcacacttctctctggatccaattgtgtgaga
tatgccactgccagcacccagaccccacctgagctcaacccacctgaggcggaaaacctg
cagccagatgaactgatccagtctgagtgtatggtggttagtggtggccagatgtacaca
atgggacgctcgggccagccttaccatgtccggggctctgtcaggggtatgggacgtgca
ggcaggggactggcgcactacgtccgctctccaagtggccacagaggagggtttgatggg
tacagaaccagccccagatctgctggaggttttgtcccagtttctcattccatgagggac
atgacatccactcccattaatgcaagggagaccggataccattctaattacaagcatggt
ggcccagggggacagagaaccaactcaagtgctggatggagtgactcgtctcaggtgagc
agccctgatcgggagggggcgtacatggttgaccttgtggactctggccacggtgactcg
ctctccgtcgacatgccggtcactccacaggggacgcacaccctcatgcccctgcacgtg
tacccgatctcccagcagatcagggtggccttctctgctgctcgcaccttcaacttcgcc
ccgggcactctcgaccaaccgatcgcgttcgacctgctgcacagcaatgtcggcgagatg
ttcgacatgccgtccgggcgtttcacctgcccggtgtcgggcacctacgtcttcatcttc
cacatcctcaagctagcggtcaacgtgccgctatacatcaacctcatgcgcaacgaggag
gtggtggtgtccggctacgccaacgatggggcgcctgaccacgagaccgctagcaatcat
gccgtgctgcagctgtaccaaggcgaccaactgtggctgcggctgcatcgtggcgccatc
tatggcagcagctggaagtacagcaccttctcaggcttcctgctgtatcaggactga
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