Alosa sapidissima (American shad): 121697789
Help
Entry
121697789 CDS
T11137
Name
(RefSeq) leucine-rich repeat neuronal protein 3
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121697789
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121697789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
I-set
Ig_3
LRR_14
ig
LRR_1
LRR_EndoS
fn3
Ig_2
LRRCT
LRR_LRWD1
LRR_RPS2
LRRNT
LRR_Zer-1
LRR_At5g56370
Pur_ac_phosph_N
LRR_NXF1-5
IncD
Motif
Other DBs
NCBI-GeneID:
121697789
NCBI-ProteinID:
XP_041935430
LinkDB
All DBs
Position
22:complement(20502224..20519461)
Genome browser
AA seq
711 aa
AA seq
DB search
MKDVWLVDCLLMGLAVAAFVPASVARVDCPKSCVCEVRPWFSPTSVYKEGPTVDCNDLGL
FEVPERLPADTQVLMMQTNNIVKVDRPLEYLVNVSEIDLSQNNVTSVADLDLGRLPQLLS
LHLEENWICTLPDDALSRLPSLQELYLNHNLISSISPAAFRGLRGLLRLHLNSNQLRTIS
SEWFESTPSLEILMIGENPIPTIPDLTFRPLRNLRSLVLTRMNLSQLPDNSLAGLENLES
ISFYDNTFPEVPHGALRHLKNLKFLDLNKNPIGRIQRGDFVDMPHLKELEINSMPELVSI
DSLALDNLPELTKIEATNNPKLSYIHPSAFRKLPRLETLMLNGNALSALHRVTVESLPNL
REVSLYSNPIRCDCVVRWMSANRTRVRFMQPDYLFCSEPPEYEGQRVRQVHFREMTETCL
PLISPESLPARLSVANGSAVSLHCRAFAEPEPEIYWITPAGTRVLPNTVTEKYYMHPEGT
FDIYDITESEAGLYTCVAHNLIGADLKSVSVEVNGYFPQPANNSFNVDIKSIEANSVLVS
WKASHGSLAPNIKWFTVSGTKNPTVAFTARVPSDVKVYNLTHLSPATQYKVCVDIPNVLH
TQRSKCINVTTKKVEATAVAAAVLASERWDVAVISVFGVLLTAVSVACLLIYVHLGNQQL
YGDLRKCRSTTPLAPQAALHSPFTRLWVADKDMPGAEEVRATVINVSDNAF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgtgtggcttgtggattgtttgttaatggggctcgctgtggcggcctttgtt
ccagcttctgtggccagagtcgattgccccaagtcctgtgtgtgtgaagtccggccctgg
ttctccccgacgtcggtgtacaaagagggccccacggtggactgcaacgacttggggctt
ttcgaggtccctgagagactacccgcggacacgcaggtgctgatgatgcagacgaacaac
attgtcaaggtcgaccggcctttggaatacctcgtcaatgtgtccgagatcgacctgtcg
caaaacaacgtgacgtccgtggccgacctggacctgggtcgtctgccgcagttgctctcg
ctgcacctggaggagaactggatttgcacgttgcccgatgacgcgctctcccgcctcccg
agccttcaggagctctacctgaaccacaacctgatctcgtcgatctcgccggcggccttc
agggggctccgcggcctgctgcggctccacctgaactccaaccagctccggaccatcagc
agcgagtggttcgagtccacgccgagcctggagatcctgatgataggcgagaaccccatc
cccactatccccgatttgaccttcaggcccctgaggaaccttcggagcctggtcctgaca
aggatgaatctctcgcagttacccgacaactctctggccggcttggagaacctcgagagc
atctccttctatgacaacaccttccccgaggtgccacatggggccctgaggcacctcaag
aacctaaagttcctcgacctgaacaagaacccgatcggtcggatccagcggggtgatttt
gtggacatgccgcacctgaaggagctggaaataaacagcatgccggagctggtgtccatc
gacagcctggccctggacaacctccctgagctcaccaagatcgaggccaccaacaacccc
aagctgtcctacatccacccgagcgccttccggaagcttccacgcctggagacactcatg
ctgaacggcaacgcactgagtgccctgcatcgggtcaccgtggagtcgctgcccaatctg
cgcgaggtcagcctctactccaaccccatccgctgcgactgcgtggttcgctggatgagc
gccaaccggacgcgcgtgcgcttcatgcagcccgactacctcttctgctcggagccaccc
gagtacgagggccagcgcgtgcggcaggtgcacttccgcgagatgaccgagacgtgcctg
ccgctcatctcgcctgagagcctgccggcgcgcctgagcgtggccaacggcagtgccgtc
tcactccactgccgcgccttcgccgagcccgagccggagatctactggatcacgccggcg
ggcacgcgcgtcctgcccaacaccgtgaccgagaagtactacatgcaccccgaggggacg
ttcgacatctatgacatcacagagagcgaggccggcctgtacacctgcgtggctcacaac
ctcattggtgccgacctgaagtccgtctcggtggaggttaacggatatttcccgcaaccg
gcaaacaactccttcaatgtggacatcaagtccatagaggccaactcggtgctggtgtcc
tggaaggcgtcccacgggagcctggcgcccaacatcaagtggttcaccgtctcaggcacg
aaaaaccccaccgtggcattcaccgcccgcgtcccgtccgacgtcaaggtgtacaacctg
acacacctctctccagccacccagtacaaggtgtgcgtggacatccccaacgtgctgcac
acgcagaggtccaagtgcatcaacgtcaccacgaagaaggtcgaggccactgcggtggcc
gctgcggtgctcgcgtccgaacgctgggacgtggcggtcatcagtgtgttcggcgtgctc
ctcaccgccgtgtcggtcgcctgcttgctcatctacgtgcacctagggaaccagcaactc
tacggagacctgcgcaagtgccggtccacaactccgttggcaccgcaagcggcactgcac
tcccccttcacccggctctgggtggcggacaaagacatgccaggcgcagaggaagtgaga
gccacagtcataaacgtgtcggacaacgctttctaa
DBGET
integrated database retrieval system
