Alosa sapidissima (American shad): 121697823
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Entry
121697823 CDS
T11137
Name
(RefSeq) protein SON isoform X1
KO
K23718
protein SON
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asad03041
]
121697823
Spliceosome [BR:
asad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
121697823
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Ortholog
Paralog
GFIT
Motif
Pfam:
DND1_DSRM
RSRP
dsrm
Motif
Other DBs
NCBI-GeneID:
121697823
NCBI-ProteinID:
XP_041935504
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Position
22
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AA seq
1299 aa
AA seq
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MATNIEQIFRDFVMNKIKEIEDEGHDNSVTGEEHSKLGESLSSCTVGTEDTSSLPLACSA
EAASTQTTGTDKIPGSVEANKDPASREASSTPRKKSKKHKRHKSKKKKKKRKEEKESSSD
SLSESDGETQANTKKKKKKKKKRRKEGEKKSRSHSPTESTSASGTESESENKTSVATSKN
VSEKSGGQEKGRPQELPDIIPKVDNAASKATENATRDMKEKSKDKKQSKKSRSRSPRTKS
SRKESSRKSRSASRRKSRSRSRSKNGHKSGRHRSRSPSVRRSQRKSRSPKRGRRSRSASR
HGRKTRSRSHSSRRNRRSRSQSRRRSRSARRNRRTRSRSVVILRSERSRNQKSQRSRSKS
LHSPRQSRSRSSDRTSRSRSPHAARHSKSRSGSQSADKEQVQRAPSDSREIKSSSEALEK
ATDQDVCLPTNTTEPPATCNTEKDSTGAVDNATSKGSWKPVPFVPVGSTPVAGDSNSTAE
DPAQERTTAQVPSNEQSSNVKPVSGEASSLLIDSCVPQGDVPTKMSENPAEKDSHVSAPP
KKEKGSASPSPSGRGSKSPNRQRHSASSSPRGKRSRSTSRKRKSKSKSPEKSKKSRSSSR
NRKKKSKTPSRRRRSRSKSRTRSKRSKSRSPKRKRSKSRSPGRRRRSRSRSSGRNRRSRS
RSGSRRRRGGGFGTQRFSGRDRWKREPSHSPVLILRKKRSSSQTRRSASKTPPRLTELDK
DQLLEIAKANAAAMCAKAGMPIPESLRPKALQLPLPTPNQSSLSLPLPLPNMPGMGMPSM
QGMGGMQGMGGMQGMGGMQGMGGMQGMGGMQGMGGMQGMGGMQGMGGMQGMGGMGGMQGM
GGMQCMGGMPGMGGMGMGLPAAMNAAMASTIAATMTAAMSSMGALAGMQPFPPLPTITNK
PPPAPTPNLTNIEEAKKKVTKQVNSISIKEFTEKCKKISESKEEMAVAKPHVSDDEDEGK
MFAGGALKENKGISFSLNNATVKPAPPRTDAAYAKEFPVSSGSQHRKKESEGAYGEWVPV
EKSDKASANAAASTAAGGSTAAAPEEPVKDSDSVFPEAPSQPVDITVAVSERAEAQKRLA
ENPFDVSAICMLSRAQEQVDAWAQSNTIPGLFTGSTGAQVLSSDELSNSGPQAWIKKDQF
LRAAPVSGGMGEMLMRKMGWRLGEGLGKHREGTVEPIIIDFKIDRRGLVAEGEKTQKSGG
LIVMKDLMGKHPVSALIELCNKKKWLPPDFVLVHHSGPDHRKNFLFKVVVNGSEYQPQTP
SPNKKHAKAMAATVALQAMGEVSGDSVPTGPVFTAASTT
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaatatcgagcagatttttcgggattttgtaatgaataaaataaaagaaata
gaggatgaaggtcacgataacagtgtaacaggtgaagagcattccaaattgggagagagt
ctctccagctgtaccgtaggcacagaggacaccagcagtctaccccttgcctgttctgct
gaagctgctagcacacagacgacaggcaccgacaaaatccctggctctgtagaagcaaat
aaggacccagccagcagagaggcgagcagcaccccacgcaagaaaagcaagaagcacaag
cgacacaagagcaagaagaagaagaagaaacggaaggaggagaaggaaagcagctcagac
tcactatcagagtcagatggagagacacaggccaacacgaagaagaaaaagaagaaaaaa
aagaaacgacggaaagaaggagagaaaaagtcccgatcgcactcacccacagagagtaca
tcagcatcagggaccgagtctgaatcggaaaacaaaacctctgtggccacctctaagaac
gtttcggagaagtctggaggccaggagaagggaagacctcaagaactacctgacatcatt
ccaaaagttgataatgctgcttcaaaggccacagaaaacgcaactagagacatgaaagaa
aaatccaaagacaaaaagcagtccaagaaaagccgcagtaggtctccaagaacaaaatcc
tctcgaaaagaaagctcaagaaagtcccgatcggcatcgaggaggaaatccagatctaga
tctagaagtaaaaatggtcacaaatcgggaaggcacaggtctaggtctccatctgtcaga
cgatcacaacgcaagtcccgatctcctaaacgggggagacgctcaaggtcagcctctcgg
catggcaggaaaacaaggtccaggtcacactcttcacgacgaaacagacgttcgaggtca
caatcacggcgcaggtctcgatcagcaaggcggaacaggcggactcgatcaaggtccgtc
gtcatattaagaagtgaaaggtcacgaaaccagaagagtcaacggtcacggtccaagtca
ttgcattctccacggcagtcaagatccaggtcttcagacaggacttccaggtcacgttct
cctcatgctgctaggcattctaaatccaggtcagggtctcaatccgcagacaaagagcag
gtccaaagggcaccgtcagactctagggagatcaaaagttctagtgaagcacttgagaag
gcaacagaccaggatgtgtgtctgcctacaaacaccactgaaccacctgccacctgcaat
actgagaaagacagcacaggtgccgtcgataacgctacgtctaaagggtcttggaaaccg
gtgccctttgttcctgttggctcaacgcctgtagcgggagattcaaacagcactgctgag
gacccagcacaggaacgaacaactgcccaggtgccttcaaatgagcagagctcaaatgtg
aagcctgtctctggagaggcttcctctcttctcatagactcttgtgtgcctcaaggtgat
gtccccactaaaatgtcggagaacccagctgagaaagacagtcatgtctctgcaccccct
aagaaggagaaaggctcagcgtcaccgtcgccctcagggagaggttcgaaatccccaaat
cgtcagaggcattctgcgtccagttcaccaagaggaaaacgctccaggtcaacctcgagg
aaacgaaagtccaagtcaaaatctccagagaaaagcaagaaatcaaggtcatcctcacgc
aacagaaagaagaaatcaaaaactccctcgcgaaggaggaggtccaggtctaaatccaga
acacgatcaaagcgctccaaatccaggtcacccaagaggaaaaggtcaaagtctcgttct
ccaggacgacgcaggcgctccagatctcgctcctctggccggaacaggaggtcacggtct
cgctccgggtccaggcgaagaagggggggtggattcggtacgcaacggtttagtggacgt
gaccggtggaaacgtgagccaagccactcgcctgtgctcattctgcgcaagaagcggtca
tcgtcacaaacacggagaagcgccagtaagacaccaccacgtctcactgaactggataaa
gaccagctgctagagatcgccaaggctaatgctgctgctatgtgtgccaaagctggcatg
cccattcctgagagcctgcgacccaaagccctccagttgcccctacccaccccaaaccaa
tcatctctctccttaccactgcccttacctaatatgccagggatgggtatgccatcgatg
caaggcatgggtggcatgcaaggcatgggtggcatgcagggcatgggtggcatgcaggga
atgggtggcatgcaaggcatgggtggcatgcagggcatgggtggcatgcaaggcatggga
ggcatgcagggcatgggtggcatgcaaggcatgggtggcatgggtggaatgcagggcatg
ggtggcatgcagtgtatgggagggatgccaggcatgggagggatgggtatgggtttgcca
gctgctatgaacgctgctatggccagcacaattgccgccaccatgactgcagccatgtcg
agtatgggggccctggcaggtatgcagcctttcccaccccttcccaccattaccaacaag
cctccaccggcacccactccgaacttgactaatattgaggaggctaaaaagaaggtcact
aaacaagttaacagcatcagcatcaaggagttcacagagaaatgcaagaaaatatctgag
agcaaagaggagatggctgttgccaagccccatgtgtcggacgacgaagatgaggggaag
atgtttgctggaggagccctgaaggagaacaagggcatctccttcagcctcaataacgcc
acggtgaagccggccccgccgcgcacagacgccgcctacgccaaggagttcccggtgtcg
tccggctcgcagcaccgcaagaaggagagcgagggggcgtacggcgagtgggtgcccgtg
gagaagagcgacaaggcctccgctaacgccgcagcctcgactgccgccggagggtcgact
gccgcagccccggaggagccggtgaaagacagcgacagcgtgtttccggaagcaccctca
cagccagtggacattacagtggccgtgagcgaacgtgccgaggctcagaagcgtcttgcg
gaaaaccccttcgacgtgagcgccatatgcatgctatcccgagcgcaggaacaggtggat
gcgtgggcccagtcgaacaccatcccaggtctcttcacaggctccacgggagcgcaggtg
ctctcctcagacgagttgtccaacagtggcccgcaggcttggatcaagaaggaccagttc
ctgcgggcggcgccggtgtcgggcggcatgggcgagatgctgatgcgcaagatgggctgg
cgcttgggcgagggcctgggcaagcaccgcgagggcaccgtggaacccatcatcattgac
ttcaagatcgaccgccgaggtttggtggcagagggggagaagacccagaagtctggaggt
ctgattgtgatgaaggacctaatggggaagcatccagtgtctgccctgattgagctgtgc
aacaagaagaagtggttacccccagattttgtcttggtgcatcacagcggcccggaccat
cgcaagaacttcctctttaaggtggtggtgaacgggagtgaataccagccgcagacgccc
agccccaacaaaaaacacgccaaggccatggccgccaccgtggcactgcaagccatgggc
gaggtctctggcgacagcgtccccaccggccctgtgtttaccgctgcctcgacaacctga
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