Alosa sapidissima (American shad): 121697928
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Entry
121697928 CDS
T11137
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03030
DNA replication
asad03410
Base excision repair
asad03420
Nucleotide excision repair
asad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121697928 (rfc3)
03410 Base excision repair
121697928 (rfc3)
03420 Nucleotide excision repair
121697928 (rfc3)
03430 Mismatch repair
121697928 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asad03032
]
121697928 (rfc3)
03036 Chromosome and associated proteins [BR:
asad03036
]
121697928 (rfc3)
03400 DNA repair and recombination proteins [BR:
asad03400
]
121697928 (rfc3)
DNA replication proteins [BR:
asad03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121697928 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
121697928 (rfc3)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121697928 (rfc3)
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121697928 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
121697928 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
ABC_tran
DUF2247
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
121697928
NCBI-ProteinID:
XP_041935611
LinkDB
All DBs
Position
2:complement(17674759..17676772)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLAKLDYHKEQANKLKNLVHCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSITAPSKKKIEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQ
IQSSTQRDFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVISPIRSRCL
AVRVSLPSVEEVCSVLTSVCKKEGLLLPTELAKQIAERSGRNLRKALLMCEACRVQQYPF
SADQEIPETDWEVYVRETANAIVSQQSPQRLLEVRARLYELLTHCIPPEVIMKGLLTELL
SNCDGHLKGEVVQLAAYYEHRLQLGNKAIYHLEAFVAKFMAIYKKFMEDGLDNFMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatgggtggataagtacagacctacatctctagcaaaactggactaccacaaa
gagcaggcgaataaactgaaaaacttggtacactgtggagactttcctcacctcctagtt
tatggtccgtctggcgccggaaagaaaactcgcataatgtgtttgctgcgcgaattgtat
ggcgcaggtgtggagaagctccgcatcgagcatcagtctatcacagcgccttcaaagaag
aaaatagaaataaacacaatagcaagcaactatcacttggaagtgaatcctagcgacgcg
ggcaacagtgacagagtggtgatacaggagctgataaaaactgtggcgcagtctcagcag
attcagtctagcacgcagagggatttcaaggtggtactgctgactgaggtggaccgactc
accaaagacgcccagcacgcgctgcgccgcaccatggagaagtacatgtccacgtgccgc
ctgattctctgctgcaactccacatccaaggtcatctcccccatcaggagcagatgtctg
gctgtgcgggtttccttgcccagtgtggaagaggtgtgtagcgtcctgaccagcgtctgc
aagaaggaggggctgctgctccccaccgagctggccaagcaaatcgcagagcggtcgggc
cgcaacctgcgcaaagccctgctgatgtgtgaggcgtgccgcgtgcagcagtaccccttc
tcggccgaccaggagatccccgagaccgactgggaggtgtatgtgcgggagacggccaac
gccatcgtcagccagcagagcccacagcggctgctagaggtgcgcgcccgactgtatgag
ctcctgacccactgcatcccaccggaggtgataatgaaggggctgttgacagagctgctg
agcaactgcgacgggcacctcaagggcgaggtggttcagctggccgcctattatgagcat
cggcttcagcttggcaacaaggcaatctaccacctggaggcctttgtggccaagttcatg
gctatctacaagaagttcatggaggacggcttggataatttcatgttctga
DBGET
integrated database retrieval system