KEGG   Alosa sapidissima (American shad): 121697928
Entry
121697928         CDS       T11137                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad03030  DNA replication
asad03410  Base excision repair
asad03420  Nucleotide excision repair
asad03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:asad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    121697928 (rfc3)
   03410 Base excision repair
    121697928 (rfc3)
   03420 Nucleotide excision repair
    121697928 (rfc3)
   03430 Mismatch repair
    121697928 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asad03032]
    121697928 (rfc3)
   03036 Chromosome and associated proteins [BR:asad03036]
    121697928 (rfc3)
   03400 DNA repair and recombination proteins [BR:asad03400]
    121697928 (rfc3)
DNA replication proteins [BR:asad03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    121697928 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    121697928 (rfc3)
Chromosome and associated proteins [BR:asad03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    121697928 (rfc3)
DNA repair and recombination proteins [BR:asad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     121697928 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    121697928 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 AAA_11 ABC_tran DUF2247 ATPgrasp_ST
Other DBs
NCBI-GeneID: 121697928
NCBI-ProteinID: XP_041935611
LinkDB
Position
2:complement(17674759..17676772)
AA seq 356 aa
MSLWVDKYRPTSLAKLDYHKEQANKLKNLVHCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSITAPSKKKIEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQ
IQSSTQRDFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVISPIRSRCL
AVRVSLPSVEEVCSVLTSVCKKEGLLLPTELAKQIAERSGRNLRKALLMCEACRVQQYPF
SADQEIPETDWEVYVRETANAIVSQQSPQRLLEVRARLYELLTHCIPPEVIMKGLLTELL
SNCDGHLKGEVVQLAAYYEHRLQLGNKAIYHLEAFVAKFMAIYKKFMEDGLDNFMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttatgggtggataagtacagacctacatctctagcaaaactggactaccacaaa
gagcaggcgaataaactgaaaaacttggtacactgtggagactttcctcacctcctagtt
tatggtccgtctggcgccggaaagaaaactcgcataatgtgtttgctgcgcgaattgtat
ggcgcaggtgtggagaagctccgcatcgagcatcagtctatcacagcgccttcaaagaag
aaaatagaaataaacacaatagcaagcaactatcacttggaagtgaatcctagcgacgcg
ggcaacagtgacagagtggtgatacaggagctgataaaaactgtggcgcagtctcagcag
attcagtctagcacgcagagggatttcaaggtggtactgctgactgaggtggaccgactc
accaaagacgcccagcacgcgctgcgccgcaccatggagaagtacatgtccacgtgccgc
ctgattctctgctgcaactccacatccaaggtcatctcccccatcaggagcagatgtctg
gctgtgcgggtttccttgcccagtgtggaagaggtgtgtagcgtcctgaccagcgtctgc
aagaaggaggggctgctgctccccaccgagctggccaagcaaatcgcagagcggtcgggc
cgcaacctgcgcaaagccctgctgatgtgtgaggcgtgccgcgtgcagcagtaccccttc
tcggccgaccaggagatccccgagaccgactgggaggtgtatgtgcgggagacggccaac
gccatcgtcagccagcagagcccacagcggctgctagaggtgcgcgcccgactgtatgag
ctcctgacccactgcatcccaccggaggtgataatgaaggggctgttgacagagctgctg
agcaactgcgacgggcacctcaagggcgaggtggttcagctggccgcctattatgagcat
cggcttcagcttggcaacaaggcaatctaccacctggaggcctttgtggccaagttcatg
gctatctacaagaagttcatggaggacggcttggataatttcatgttctga

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